Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smndc1Q8BGT7 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.39■□□□□ 0.53
Smndc1Q8BGT7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smndc1Q8BGT7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.39■□□□□ 0.53
Smndc1Q8BGT7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smndc1Q8BGT7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smndc1Q8BGT7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smndc1Q8BGT7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smndc1Q8BGT7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smndc1Q8BGT7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.38■□□□□ 0.53
Smndc1Q8BGT7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smndc1Q8BGT7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smndc1Q8BGT7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smndc1Q8BGT7 Fst-202ENSMUST00000223640 2612 ntBASIC18.38■□□□□ 0.53
Smndc1Q8BGT7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smndc1Q8BGT7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.38■□□□□ 0.53
Smndc1Q8BGT7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smndc1Q8BGT7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smndc1Q8BGT7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smndc1Q8BGT7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Smndc1Q8BGT7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smndc1Q8BGT7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smndc1Q8BGT7 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.37■□□□□ 0.53
Smndc1Q8BGT7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Smndc1Q8BGT7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smndc1Q8BGT7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smndc1Q8BGT7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smndc1Q8BGT7 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.37■□□□□ 0.53
Smndc1Q8BGT7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smndc1Q8BGT7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smndc1Q8BGT7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smndc1Q8BGT7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smndc1Q8BGT7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smndc1Q8BGT7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smndc1Q8BGT7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smndc1Q8BGT7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smndc1Q8BGT7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smndc1Q8BGT7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smndc1Q8BGT7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smndc1Q8BGT7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smndc1Q8BGT7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smndc1Q8BGT7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Smndc1Q8BGT7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smndc1Q8BGT7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smndc1Q8BGT7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.36■□□□□ 0.53
Smndc1Q8BGT7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.36■□□□□ 0.53
Smndc1Q8BGT7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smndc1Q8BGT7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smndc1Q8BGT7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smndc1Q8BGT7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Smndc1Q8BGT7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smndc1Q8BGT7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Smndc1Q8BGT7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Smndc1Q8BGT7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smndc1Q8BGT7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smndc1Q8BGT7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smndc1Q8BGT7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smndc1Q8BGT7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smndc1Q8BGT7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Smndc1Q8BGT7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smndc1Q8BGT7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smndc1Q8BGT7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smndc1Q8BGT7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smndc1Q8BGT7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smndc1Q8BGT7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smndc1Q8BGT7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smndc1Q8BGT7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.34■□□□□ 0.53
Smndc1Q8BGT7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smndc1Q8BGT7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smndc1Q8BGT7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.34■□□□□ 0.53
Smndc1Q8BGT7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smndc1Q8BGT7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smndc1Q8BGT7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smndc1Q8BGT7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smndc1Q8BGT7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smndc1Q8BGT7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smndc1Q8BGT7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Smndc1Q8BGT7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.34■□□□□ 0.53
Smndc1Q8BGT7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Smndc1Q8BGT7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
Smndc1Q8BGT7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smndc1Q8BGT7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.33■□□□□ 0.53
Smndc1Q8BGT7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smndc1Q8BGT7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smndc1Q8BGT7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smndc1Q8BGT7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smndc1Q8BGT7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smndc1Q8BGT7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smndc1Q8BGT7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smndc1Q8BGT7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smndc1Q8BGT7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Smndc1Q8BGT7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smndc1Q8BGT7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smndc1Q8BGT7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
Smndc1Q8BGT7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.32■□□□□ 0.52
Smndc1Q8BGT7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.32■□□□□ 0.52
Smndc1Q8BGT7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smndc1Q8BGT7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Smndc1Q8BGT7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Smndc1Q8BGT7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms