Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim6Q8BGE7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.18■□□□□ 0.82
Trim6Q8BGE7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim6Q8BGE7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim6Q8BGE7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim6Q8BGE7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Trim6Q8BGE7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim6Q8BGE7 Gm22238-201ENSMUST00000175222 88 ntBASIC20.17■□□□□ 0.82
Trim6Q8BGE7 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.17■□□□□ 0.82
Trim6Q8BGE7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.17■□□□□ 0.82
Trim6Q8BGE7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim6Q8BGE7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim6Q8BGE7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim6Q8BGE7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trim6Q8BGE7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim6Q8BGE7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim6Q8BGE7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim6Q8BGE7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim6Q8BGE7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim6Q8BGE7 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.16■□□□□ 0.82
Trim6Q8BGE7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.16■□□□□ 0.82
Trim6Q8BGE7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim6Q8BGE7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.16■□□□□ 0.82
Trim6Q8BGE7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim6Q8BGE7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.16■□□□□ 0.82
Trim6Q8BGE7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim6Q8BGE7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim6Q8BGE7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim6Q8BGE7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim6Q8BGE7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim6Q8BGE7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim6Q8BGE7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim6Q8BGE7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trim6Q8BGE7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim6Q8BGE7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim6Q8BGE7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Trim6Q8BGE7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim6Q8BGE7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Trim6Q8BGE7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim6Q8BGE7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim6Q8BGE7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim6Q8BGE7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim6Q8BGE7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim6Q8BGE7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trim6Q8BGE7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Trim6Q8BGE7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trim6Q8BGE7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim6Q8BGE7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim6Q8BGE7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim6Q8BGE7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim6Q8BGE7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trim6Q8BGE7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trim6Q8BGE7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim6Q8BGE7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim6Q8BGE7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trim6Q8BGE7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trim6Q8BGE7 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.13■□□□□ 0.81
Trim6Q8BGE7 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.13■□□□□ 0.81
Trim6Q8BGE7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim6Q8BGE7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim6Q8BGE7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim6Q8BGE7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim6Q8BGE7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim6Q8BGE7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim6Q8BGE7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Trim6Q8BGE7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim6Q8BGE7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Gm9959-201ENSMUST00000068277 390 ntBASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim6Q8BGE7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim6Q8BGE7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trim6Q8BGE7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim6Q8BGE7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim6Q8BGE7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim6Q8BGE7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim6Q8BGE7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.11■□□□□ 0.81
Trim6Q8BGE7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim6Q8BGE7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim6Q8BGE7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.11■□□□□ 0.81
Trim6Q8BGE7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim6Q8BGE7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim6Q8BGE7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Trim6Q8BGE7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms