Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Npas4Q8BGD7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Npas4Q8BGD7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Npas4Q8BGD7 Mir7071-201ENSMUST00000184847 69 ntBASIC20.18■□□□□ 0.82
Npas4Q8BGD7 Gm2559-201ENSMUST00000201323 363 ntBASIC20.18■□□□□ 0.82
Npas4Q8BGD7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.18■□□□□ 0.82
Npas4Q8BGD7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Npas4Q8BGD7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Npas4Q8BGD7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Npas4Q8BGD7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Npas4Q8BGD7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Npas4Q8BGD7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Npas4Q8BGD7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Npas4Q8BGD7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.18■□□□□ 0.82
Npas4Q8BGD7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npas4Q8BGD7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npas4Q8BGD7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npas4Q8BGD7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Npas4Q8BGD7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Npas4Q8BGD7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Npas4Q8BGD7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npas4Q8BGD7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npas4Q8BGD7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npas4Q8BGD7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Npas4Q8BGD7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npas4Q8BGD7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npas4Q8BGD7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Npas4Q8BGD7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Npas4Q8BGD7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npas4Q8BGD7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.16■□□□□ 0.82
Npas4Q8BGD7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npas4Q8BGD7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npas4Q8BGD7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npas4Q8BGD7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npas4Q8BGD7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npas4Q8BGD7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npas4Q8BGD7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Npas4Q8BGD7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.16■□□□□ 0.82
Npas4Q8BGD7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Npas4Q8BGD7 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.15■□□□□ 0.82
Npas4Q8BGD7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Npas4Q8BGD7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Npas4Q8BGD7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Npas4Q8BGD7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Npas4Q8BGD7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Npas4Q8BGD7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Npas4Q8BGD7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Npas4Q8BGD7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Npas4Q8BGD7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Npas4Q8BGD7 Gm5643-201ENSMUST00000117081 966 ntBASIC20.14■□□□□ 0.81
Npas4Q8BGD7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.14■□□□□ 0.81
Npas4Q8BGD7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Npas4Q8BGD7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.14■□□□□ 0.81
Npas4Q8BGD7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Npas4Q8BGD7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Npas4Q8BGD7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Npas4Q8BGD7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.13■□□□□ 0.81
Npas4Q8BGD7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Npas4Q8BGD7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Npas4Q8BGD7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Npas4Q8BGD7 Mir6982-201ENSMUST00000184354 68 ntBASIC20.13■□□□□ 0.81
Npas4Q8BGD7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Npas4Q8BGD7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Npas4Q8BGD7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Npas4Q8BGD7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Npas4Q8BGD7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Npas4Q8BGD7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Npas4Q8BGD7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.12■□□□□ 0.81
Npas4Q8BGD7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Npas4Q8BGD7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Npas4Q8BGD7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Npas4Q8BGD7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Npas4Q8BGD7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Npas4Q8BGD7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Npas4Q8BGD7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Npas4Q8BGD7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Npas4Q8BGD7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Npas4Q8BGD7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Npas4Q8BGD7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Npas4Q8BGD7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Npas4Q8BGD7 Dio3-201ENSMUST00000097228 1449 ntBASIC20.11■□□□□ 0.81
Npas4Q8BGD7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Npas4Q8BGD7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Npas4Q8BGD7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.11■□□□□ 0.81
Npas4Q8BGD7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.11■□□□□ 0.81
Npas4Q8BGD7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Npas4Q8BGD7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Npas4Q8BGD7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Npas4Q8BGD7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Npas4Q8BGD7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.11■□□□□ 0.81
Npas4Q8BGD7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.1■□□□□ 0.81
Npas4Q8BGD7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npas4Q8BGD7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npas4Q8BGD7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Npas4Q8BGD7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Npas4Q8BGD7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.1■□□□□ 0.81
Npas4Q8BGD7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.1■□□□□ 0.81
Npas4Q8BGD7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npas4Q8BGD7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npas4Q8BGD7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 121.3 ms