Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim36Q80WG7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim36Q80WG7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim36Q80WG7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Trim36Q80WG7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim36Q80WG7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trim36Q80WG7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trim36Q80WG7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Trim36Q80WG7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim36Q80WG7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim36Q80WG7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim36Q80WG7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim36Q80WG7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
Trim36Q80WG7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim36Q80WG7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trim36Q80WG7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim36Q80WG7 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.31■□□□□ 0.52
Trim36Q80WG7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim36Q80WG7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim36Q80WG7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim36Q80WG7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim36Q80WG7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trim36Q80WG7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trim36Q80WG7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim36Q80WG7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim36Q80WG7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trim36Q80WG7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim36Q80WG7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim36Q80WG7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim36Q80WG7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim36Q80WG7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim36Q80WG7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim36Q80WG7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim36Q80WG7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trim36Q80WG7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.3■□□□□ 0.52
Trim36Q80WG7 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.3■□□□□ 0.52
Trim36Q80WG7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim36Q80WG7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim36Q80WG7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trim36Q80WG7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim36Q80WG7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim36Q80WG7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim36Q80WG7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim36Q80WG7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Gm8493-201ENSMUST00000196881 489 ntBASIC18.29■□□□□ 0.52
Trim36Q80WG7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim36Q80WG7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim36Q80WG7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim36Q80WG7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.28■□□□□ 0.52
Trim36Q80WG7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim36Q80WG7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim36Q80WG7 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.28■□□□□ 0.52
Trim36Q80WG7 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.28■□□□□ 0.52
Trim36Q80WG7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim36Q80WG7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.28■□□□□ 0.52
Trim36Q80WG7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim36Q80WG7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Trim36Q80WG7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim36Q80WG7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim36Q80WG7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim36Q80WG7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim36Q80WG7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim36Q80WG7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.27■□□□□ 0.52
Trim36Q80WG7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trim36Q80WG7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim36Q80WG7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim36Q80WG7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim36Q80WG7 Gm12251-201ENSMUST00000117893 792 ntBASIC18.27■□□□□ 0.52
Trim36Q80WG7 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.27■□□□□ 0.52
Trim36Q80WG7 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.27■□□□□ 0.52
Trim36Q80WG7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim36Q80WG7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim36Q80WG7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim36Q80WG7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim36Q80WG7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.27■□□□□ 0.52
Trim36Q80WG7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim36Q80WG7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Trim36Q80WG7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms