Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdp1Q7TSG2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdp1Q7TSG2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdp1Q7TSG2 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.7■□□□□ 0.9
Ctdp1Q7TSG2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.7■□□□□ 0.9
Ctdp1Q7TSG2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.7■□□□□ 0.9
Ctdp1Q7TSG2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdp1Q7TSG2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdp1Q7TSG2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdp1Q7TSG2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdp1Q7TSG2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdp1Q7TSG2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctdp1Q7TSG2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.69■□□□□ 0.9
Ctdp1Q7TSG2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctdp1Q7TSG2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.69■□□□□ 0.9
Ctdp1Q7TSG2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctdp1Q7TSG2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ctdp1Q7TSG2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ctdp1Q7TSG2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctdp1Q7TSG2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ctdp1Q7TSG2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctdp1Q7TSG2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ctdp1Q7TSG2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
Ctdp1Q7TSG2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctdp1Q7TSG2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctdp1Q7TSG2 BC021767-201ENSMUST00000126387 1716 ntBASIC20.67■□□□□ 0.9
Ctdp1Q7TSG2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctdp1Q7TSG2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctdp1Q7TSG2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ctdp1Q7TSG2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ctdp1Q7TSG2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctdp1Q7TSG2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctdp1Q7TSG2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctdp1Q7TSG2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.67■□□□□ 0.9
Ctdp1Q7TSG2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ctdp1Q7TSG2 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.67■□□□□ 0.9
Ctdp1Q7TSG2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctdp1Q7TSG2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ctdp1Q7TSG2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdp1Q7TSG2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdp1Q7TSG2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ctdp1Q7TSG2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdp1Q7TSG2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdp1Q7TSG2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.66■□□□□ 0.9
Ctdp1Q7TSG2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdp1Q7TSG2 Gm12821-201ENSMUST00000120022 600 ntBASIC20.66■□□□□ 0.9
Ctdp1Q7TSG2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Ctdp1Q7TSG2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.66■□□□□ 0.9
Ctdp1Q7TSG2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdp1Q7TSG2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.66■□□□□ 0.9
Ctdp1Q7TSG2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdp1Q7TSG2 Rarb-207ENSMUST00000225921 2756 ntBASIC20.66■□□□□ 0.9
Ctdp1Q7TSG2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctdp1Q7TSG2 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.65■□□□□ 0.9
Ctdp1Q7TSG2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctdp1Q7TSG2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctdp1Q7TSG2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctdp1Q7TSG2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctdp1Q7TSG2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ctdp1Q7TSG2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctdp1Q7TSG2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctdp1Q7TSG2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.65■□□□□ 0.9
Ctdp1Q7TSG2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ctdp1Q7TSG2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.64■□□□□ 0.89
Ctdp1Q7TSG2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ctdp1Q7TSG2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ctdp1Q7TSG2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Ctdp1Q7TSG2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ctdp1Q7TSG2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ctdp1Q7TSG2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ctdp1Q7TSG2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ctdp1Q7TSG2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.64■□□□□ 0.89
Ctdp1Q7TSG2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdp1Q7TSG2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdp1Q7TSG2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdp1Q7TSG2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdp1Q7TSG2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdp1Q7TSG2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdp1Q7TSG2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.63■□□□□ 0.89
Ctdp1Q7TSG2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdp1Q7TSG2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdp1Q7TSG2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
Ctdp1Q7TSG2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdp1Q7TSG2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdp1Q7TSG2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ctdp1Q7TSG2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ctdp1Q7TSG2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ctdp1Q7TSG2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ctdp1Q7TSG2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ctdp1Q7TSG2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.62■□□□□ 0.89
Ctdp1Q7TSG2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ctdp1Q7TSG2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.62■□□□□ 0.89
Ctdp1Q7TSG2 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.62■□□□□ 0.89
Ctdp1Q7TSG2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ctdp1Q7TSG2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctdp1Q7TSG2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctdp1Q7TSG2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctdp1Q7TSG2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctdp1Q7TSG2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctdp1Q7TSG2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms