Protein–RNA interactions for Protein: Q6VH22

Ift172, Intraflagellar transport protein 172 homolog, mousemouse

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift172Q6VH22 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ift172Q6VH22 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
Ift172Q6VH22 Gm10698-201ENSMUST00000182663 604 ntBASIC26.31■■□□□ 1.8
Ift172Q6VH22 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ift172Q6VH22 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ift172Q6VH22 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ift172Q6VH22 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ift172Q6VH22 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ift172Q6VH22 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC26.31■■□□□ 1.8
Ift172Q6VH22 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ift172Q6VH22 Gm29994-201ENSMUST00000195495 1193 ntBASIC26.31■■□□□ 1.8
Ift172Q6VH22 Gm2559-201ENSMUST00000201323 363 ntBASIC26.31■■□□□ 1.8
Ift172Q6VH22 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC26.31■■□□□ 1.8
Ift172Q6VH22 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ift172Q6VH22 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ift172Q6VH22 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Ift172Q6VH22 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Ift172Q6VH22 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ift172Q6VH22 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ift172Q6VH22 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC26.29■■□□□ 1.8
Ift172Q6VH22 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ift172Q6VH22 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
Ift172Q6VH22 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Ift172Q6VH22 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Ift172Q6VH22 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ift172Q6VH22 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ift172Q6VH22 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
Ift172Q6VH22 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC26.28■■□□□ 1.8
Ift172Q6VH22 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ift172Q6VH22 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ift172Q6VH22 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Ift172Q6VH22 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Ift172Q6VH22 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Ift172Q6VH22 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ift172Q6VH22 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ift172Q6VH22 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Ift172Q6VH22 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC26.27■■□□□ 1.8
Ift172Q6VH22 AC130671.1-201ENSMUST00000227384 1237 ntBASIC26.27■■□□□ 1.8
Ift172Q6VH22 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ift172Q6VH22 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Ift172Q6VH22 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC26.26■■□□□ 1.79
Ift172Q6VH22 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Ift172Q6VH22 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ift172Q6VH22 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC26.25■■□□□ 1.79
Ift172Q6VH22 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ift172Q6VH22 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC26.25■■□□□ 1.79
Ift172Q6VH22 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
Ift172Q6VH22 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ift172Q6VH22 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Ift172Q6VH22 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Ift172Q6VH22 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ift172Q6VH22 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ift172Q6VH22 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ift172Q6VH22 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC26.24■■□□□ 1.79
Ift172Q6VH22 Gm26971-201ENSMUST00000182423 1072 ntBASIC26.24■■□□□ 1.79
Ift172Q6VH22 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Ift172Q6VH22 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ift172Q6VH22 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Ift172Q6VH22 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ift172Q6VH22 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC26.23■■□□□ 1.79
Ift172Q6VH22 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ift172Q6VH22 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC26.23■■□□□ 1.79
Ift172Q6VH22 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC26.22■■□□□ 1.79
Ift172Q6VH22 Gm11249-201ENSMUST00000117071 859 ntBASIC26.22■■□□□ 1.79
Ift172Q6VH22 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC26.22■■□□□ 1.79
Ift172Q6VH22 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Ift172Q6VH22 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC26.22■■□□□ 1.79
Ift172Q6VH22 Gm9484-201ENSMUST00000195892 1159 ntBASIC26.22■■□□□ 1.79
Ift172Q6VH22 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ift172Q6VH22 Gm37352-201ENSMUST00000193908 2181 ntBASIC26.22■■□□□ 1.79
Ift172Q6VH22 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ift172Q6VH22 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
Ift172Q6VH22 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Ift172Q6VH22 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ift172Q6VH22 Gm6576-201ENSMUST00000169678 883 ntBASIC26.22■■□□□ 1.79
Ift172Q6VH22 Gm37055-201ENSMUST00000191866 133 ntBASIC26.22■■□□□ 1.79
Ift172Q6VH22 AC153881.1-201ENSMUST00000214448 284 ntBASIC26.22■■□□□ 1.79
Ift172Q6VH22 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ift172Q6VH22 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ift172Q6VH22 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
Ift172Q6VH22 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
Ift172Q6VH22 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Ift172Q6VH22 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ift172Q6VH22 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Ift172Q6VH22 Gm2399-201ENSMUST00000104944 225 ntBASIC26.2■■□□□ 1.79
Ift172Q6VH22 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Ift172Q6VH22 Krtap5-1-202ENSMUST00000188274 742 ntBASIC26.2■■□□□ 1.79
Ift172Q6VH22 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Ift172Q6VH22 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ift172Q6VH22 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ift172Q6VH22 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ift172Q6VH22 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ift172Q6VH22 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ift172Q6VH22 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Ift172Q6VH22 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC26.19■■□□□ 1.78
Ift172Q6VH22 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Ift172Q6VH22 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Ift172Q6VH22 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ift172Q6VH22 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Ift172Q6VH22 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC26.19■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms