Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Timd4Q6U7R4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Timd4Q6U7R4 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.71■□□□□ 0.43
Timd4Q6U7R4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Timd4Q6U7R4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Timd4Q6U7R4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Timd4Q6U7R4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.71■□□□□ 0.42
Timd4Q6U7R4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Timd4Q6U7R4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Timd4Q6U7R4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Timd4Q6U7R4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Timd4Q6U7R4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Timd4Q6U7R4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Timd4Q6U7R4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Timd4Q6U7R4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Timd4Q6U7R4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.7■□□□□ 0.42
Timd4Q6U7R4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.7■□□□□ 0.42
Timd4Q6U7R4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.7■□□□□ 0.42
Timd4Q6U7R4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Timd4Q6U7R4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Timd4Q6U7R4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Timd4Q6U7R4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Timd4Q6U7R4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Timd4Q6U7R4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.7■□□□□ 0.42
Timd4Q6U7R4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Timd4Q6U7R4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Timd4Q6U7R4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Timd4Q6U7R4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Timd4Q6U7R4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Timd4Q6U7R4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Timd4Q6U7R4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Timd4Q6U7R4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Timd4Q6U7R4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Timd4Q6U7R4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.69■□□□□ 0.42
Timd4Q6U7R4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Timd4Q6U7R4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.69■□□□□ 0.42
Timd4Q6U7R4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Timd4Q6U7R4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Timd4Q6U7R4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Timd4Q6U7R4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.69■□□□□ 0.42
Timd4Q6U7R4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Timd4Q6U7R4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Timd4Q6U7R4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Timd4Q6U7R4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Timd4Q6U7R4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Timd4Q6U7R4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Timd4Q6U7R4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Timd4Q6U7R4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.68■□□□□ 0.42
Timd4Q6U7R4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Timd4Q6U7R4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Timd4Q6U7R4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Timd4Q6U7R4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Timd4Q6U7R4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.68■□□□□ 0.42
Timd4Q6U7R4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Timd4Q6U7R4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Timd4Q6U7R4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Timd4Q6U7R4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Timd4Q6U7R4 Gm38205-201ENSMUST00000192243 258 ntBASIC17.67■□□□□ 0.42
Timd4Q6U7R4 Gm42642-201ENSMUST00000200683 355 ntBASIC17.67■□□□□ 0.42
Timd4Q6U7R4 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.67■□□□□ 0.42
Timd4Q6U7R4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Timd4Q6U7R4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Gm26571-201ENSMUST00000181399 666 ntBASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Gm10033-202ENSMUST00000211874 928 ntBASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Timd4Q6U7R4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Timd4Q6U7R4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Timd4Q6U7R4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Timd4Q6U7R4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Timd4Q6U7R4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Timd4Q6U7R4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Timd4Q6U7R4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Timd4Q6U7R4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Timd4Q6U7R4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.65■□□□□ 0.42
Timd4Q6U7R4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Timd4Q6U7R4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Timd4Q6U7R4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Timd4Q6U7R4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
Timd4Q6U7R4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Timd4Q6U7R4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Timd4Q6U7R4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Timd4Q6U7R4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Timd4Q6U7R4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Timd4Q6U7R4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Timd4Q6U7R4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms