Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.21■□□□□ 0.99
Smarca1Q6PGB8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarca1Q6PGB8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.21■□□□□ 0.99
Smarca1Q6PGB8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarca1Q6PGB8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Smarca1Q6PGB8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Smarca1Q6PGB8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarca1Q6PGB8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarca1Q6PGB8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Smarca1Q6PGB8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarca1Q6PGB8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarca1Q6PGB8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarca1Q6PGB8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarca1Q6PGB8 Gm26571-201ENSMUST00000181399 666 ntBASIC21.2■□□□□ 0.98
Smarca1Q6PGB8 Gm42778-201ENSMUST00000199644 553 ntBASIC21.2■□□□□ 0.98
Smarca1Q6PGB8 Gm18671-201ENSMUST00000214826 683 ntBASIC21.2■□□□□ 0.98
Smarca1Q6PGB8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarca1Q6PGB8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarca1Q6PGB8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Smarca1Q6PGB8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarca1Q6PGB8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarca1Q6PGB8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.19■□□□□ 0.98
Smarca1Q6PGB8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.19■□□□□ 0.98
Smarca1Q6PGB8 Gm42569-201ENSMUST00000200539 472 ntBASIC21.19■□□□□ 0.98
Smarca1Q6PGB8 Gm10033-202ENSMUST00000211874 928 ntBASIC21.19■□□□□ 0.98
Smarca1Q6PGB8 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.19■□□□□ 0.98
Smarca1Q6PGB8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarca1Q6PGB8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
Smarca1Q6PGB8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smarca1Q6PGB8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.19■□□□□ 0.98
Smarca1Q6PGB8 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.19■□□□□ 0.98
Smarca1Q6PGB8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarca1Q6PGB8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarca1Q6PGB8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarca1Q6PGB8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarca1Q6PGB8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.18■□□□□ 0.98
Smarca1Q6PGB8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarca1Q6PGB8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarca1Q6PGB8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.18■□□□□ 0.98
Smarca1Q6PGB8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Smarca1Q6PGB8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarca1Q6PGB8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarca1Q6PGB8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smarca1Q6PGB8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarca1Q6PGB8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarca1Q6PGB8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarca1Q6PGB8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.17■□□□□ 0.98
Smarca1Q6PGB8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarca1Q6PGB8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.17■□□□□ 0.98
Smarca1Q6PGB8 Gm27405-201ENSMUST00000184201 112 ntBASIC21.17■□□□□ 0.98
Smarca1Q6PGB8 Gm7291-201ENSMUST00000199147 382 ntBASIC21.17■□□□□ 0.98
Smarca1Q6PGB8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.17■□□□□ 0.98
Smarca1Q6PGB8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Smarca1Q6PGB8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarca1Q6PGB8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smarca1Q6PGB8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.17■□□□□ 0.98
Smarca1Q6PGB8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Smarca1Q6PGB8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca1Q6PGB8 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.16■□□□□ 0.98
Smarca1Q6PGB8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.16■□□□□ 0.98
Smarca1Q6PGB8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca1Q6PGB8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca1Q6PGB8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca1Q6PGB8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca1Q6PGB8 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.16■□□□□ 0.98
Smarca1Q6PGB8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca1Q6PGB8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca1Q6PGB8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Smarca1Q6PGB8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarca1Q6PGB8 Gm9988-201ENSMUST00000069786 435 ntBASIC21.15■□□□□ 0.98
Smarca1Q6PGB8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarca1Q6PGB8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarca1Q6PGB8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarca1Q6PGB8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarca1Q6PGB8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smarca1Q6PGB8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smarca1Q6PGB8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smarca1Q6PGB8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarca1Q6PGB8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.14■□□□□ 0.97
Smarca1Q6PGB8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarca1Q6PGB8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.14■□□□□ 0.97
Smarca1Q6PGB8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarca1Q6PGB8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarca1Q6PGB8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Smarca1Q6PGB8 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.14■□□□□ 0.97
Smarca1Q6PGB8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarca1Q6PGB8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Smarca1Q6PGB8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca1Q6PGB8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca1Q6PGB8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca1Q6PGB8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca1Q6PGB8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Smarca1Q6PGB8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca1Q6PGB8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca1Q6PGB8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.13■□□□□ 0.97
Smarca1Q6PGB8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.13■□□□□ 0.97
Smarca1Q6PGB8 AV356131-201ENSMUST00000206201 750 ntBASIC21.13■□□□□ 0.97
Smarca1Q6PGB8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca1Q6PGB8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca1Q6PGB8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms