Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cachd1Q6PDJ1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.24■□□□□ 0.67
Cachd1Q6PDJ1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cachd1Q6PDJ1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cachd1Q6PDJ1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cachd1Q6PDJ1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cachd1Q6PDJ1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cachd1Q6PDJ1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cachd1Q6PDJ1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cachd1Q6PDJ1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cachd1Q6PDJ1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cachd1Q6PDJ1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.23■□□□□ 0.67
Cachd1Q6PDJ1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.23■□□□□ 0.67
Cachd1Q6PDJ1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cachd1Q6PDJ1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cachd1Q6PDJ1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cachd1Q6PDJ1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.23■□□□□ 0.67
Cachd1Q6PDJ1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cachd1Q6PDJ1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cachd1Q6PDJ1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cachd1Q6PDJ1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.23■□□□□ 0.67
Cachd1Q6PDJ1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.23■□□□□ 0.67
Cachd1Q6PDJ1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.23■□□□□ 0.67
Cachd1Q6PDJ1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cachd1Q6PDJ1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Gm17971-201ENSMUST00000190239 806 ntBASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Dio3-201ENSMUST00000097228 1449 ntBASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.22■□□□□ 0.67
Cachd1Q6PDJ1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cachd1Q6PDJ1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cachd1Q6PDJ1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cachd1Q6PDJ1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cachd1Q6PDJ1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cachd1Q6PDJ1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cachd1Q6PDJ1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cachd1Q6PDJ1 Gm23634-201ENSMUST00000175071 91 ntBASIC19.21■□□□□ 0.67
Cachd1Q6PDJ1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cachd1Q6PDJ1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cachd1Q6PDJ1 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.21■□□□□ 0.67
Cachd1Q6PDJ1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.21■□□□□ 0.67
Cachd1Q6PDJ1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cachd1Q6PDJ1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cachd1Q6PDJ1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
Cachd1Q6PDJ1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cachd1Q6PDJ1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cachd1Q6PDJ1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cachd1Q6PDJ1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cachd1Q6PDJ1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cachd1Q6PDJ1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cachd1Q6PDJ1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cachd1Q6PDJ1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cachd1Q6PDJ1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cachd1Q6PDJ1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cachd1Q6PDJ1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cachd1Q6PDJ1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cachd1Q6PDJ1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cachd1Q6PDJ1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cachd1Q6PDJ1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.19■□□□□ 0.66
Cachd1Q6PDJ1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cachd1Q6PDJ1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.19■□□□□ 0.66
Cachd1Q6PDJ1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cachd1Q6PDJ1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.19■□□□□ 0.66
Cachd1Q6PDJ1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cachd1Q6PDJ1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cachd1Q6PDJ1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cachd1Q6PDJ1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cachd1Q6PDJ1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cachd1Q6PDJ1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cachd1Q6PDJ1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cachd1Q6PDJ1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cachd1Q6PDJ1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cachd1Q6PDJ1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cachd1Q6PDJ1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cachd1Q6PDJ1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cachd1Q6PDJ1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cachd1Q6PDJ1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cachd1Q6PDJ1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cachd1Q6PDJ1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cachd1Q6PDJ1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cachd1Q6PDJ1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cachd1Q6PDJ1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cachd1Q6PDJ1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cachd1Q6PDJ1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms