Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ShbQ6PD21 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ShbQ6PD21 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ShbQ6PD21 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ShbQ6PD21 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ShbQ6PD21 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ShbQ6PD21 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ShbQ6PD21 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.91■□□□□ 0.94
ShbQ6PD21 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.91■□□□□ 0.94
ShbQ6PD21 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ShbQ6PD21 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ShbQ6PD21 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ShbQ6PD21 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ShbQ6PD21 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ShbQ6PD21 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.9■□□□□ 0.94
ShbQ6PD21 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ShbQ6PD21 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.9■□□□□ 0.94
ShbQ6PD21 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ShbQ6PD21 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ShbQ6PD21 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ShbQ6PD21 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.9■□□□□ 0.94
ShbQ6PD21 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ShbQ6PD21 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ShbQ6PD21 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ShbQ6PD21 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ShbQ6PD21 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ShbQ6PD21 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.89■□□□□ 0.94
ShbQ6PD21 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ShbQ6PD21 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ShbQ6PD21 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ShbQ6PD21 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ShbQ6PD21 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ShbQ6PD21 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ShbQ6PD21 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.88■□□□□ 0.93
ShbQ6PD21 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ShbQ6PD21 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.88■□□□□ 0.93
ShbQ6PD21 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ShbQ6PD21 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ShbQ6PD21 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ShbQ6PD21 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ShbQ6PD21 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ShbQ6PD21 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ShbQ6PD21 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.87■□□□□ 0.93
ShbQ6PD21 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ShbQ6PD21 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ShbQ6PD21 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ShbQ6PD21 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ShbQ6PD21 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ShbQ6PD21 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ShbQ6PD21 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
ShbQ6PD21 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ShbQ6PD21 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ShbQ6PD21 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ShbQ6PD21 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ShbQ6PD21 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.86■□□□□ 0.93
ShbQ6PD21 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ShbQ6PD21 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ShbQ6PD21 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ShbQ6PD21 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.86■□□□□ 0.93
ShbQ6PD21 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ShbQ6PD21 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ShbQ6PD21 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ShbQ6PD21 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ShbQ6PD21 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ShbQ6PD21 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ShbQ6PD21 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.85■□□□□ 0.93
ShbQ6PD21 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ShbQ6PD21 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
ShbQ6PD21 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ShbQ6PD21 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ShbQ6PD21 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
ShbQ6PD21 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ShbQ6PD21 Gm21814-202ENSMUST00000203277 873 ntBASIC20.84■□□□□ 0.93
ShbQ6PD21 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ShbQ6PD21 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ShbQ6PD21 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ShbQ6PD21 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ShbQ6PD21 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ShbQ6PD21 Gm6659-201ENSMUST00000174752 547 ntBASIC20.83■□□□□ 0.93
ShbQ6PD21 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
ShbQ6PD21 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ShbQ6PD21 Gm7367-201ENSMUST00000057611 492 ntBASIC20.83■□□□□ 0.93
ShbQ6PD21 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ShbQ6PD21 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ShbQ6PD21 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
ShbQ6PD21 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ShbQ6PD21 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ShbQ6PD21 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.82■□□□□ 0.92
ShbQ6PD21 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ShbQ6PD21 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ShbQ6PD21 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ShbQ6PD21 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
ShbQ6PD21 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ShbQ6PD21 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ShbQ6PD21 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ShbQ6PD21 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ShbQ6PD21 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ShbQ6PD21 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ShbQ6PD21 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ShbQ6PD21 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms