Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Zfp248Q640N4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Zfp248Q640N4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Zfp248Q640N4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Zfp248Q640N4 Gm13241-201ENSMUST00000094493 780 ntBASIC14.45□□□□□ -0.1
Zfp248Q640N4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Zfp248Q640N4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Zfp248Q640N4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Zfp248Q640N4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Zfp248Q640N4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Zfp248Q640N4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Zfp248Q640N4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Zfp248Q640N4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Zfp248Q640N4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Zfp248Q640N4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.44□□□□□ -0.1
Zfp248Q640N4 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.44□□□□□ -0.1
Zfp248Q640N4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.44□□□□□ -0.1
Zfp248Q640N4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Zfp248Q640N4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Zfp248Q640N4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Zfp248Q640N4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Zfp248Q640N4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Zfp248Q640N4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Zfp248Q640N4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Zfp248Q640N4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.43□□□□□ -0.1
Zfp248Q640N4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Zfp248Q640N4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Zfp248Q640N4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Zfp248Q640N4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Zfp248Q640N4 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.43□□□□□ -0.1
Zfp248Q640N4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Zfp248Q640N4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Zfp248Q640N4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Zfp248Q640N4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Zfp248Q640N4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Zfp248Q640N4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Zfp248Q640N4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.42□□□□□ -0.1
Zfp248Q640N4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Zfp248Q640N4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Zfp248Q640N4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Zfp248Q640N4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Zfp248Q640N4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Zfp248Q640N4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Zfp248Q640N4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Zfp248Q640N4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Zfp248Q640N4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Zfp248Q640N4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Zfp248Q640N4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Zfp248Q640N4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Zfp248Q640N4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Zfp248Q640N4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Zfp248Q640N4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Zfp248Q640N4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Zfp248Q640N4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Zfp248Q640N4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Zfp248Q640N4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Zfp248Q640N4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Zfp248Q640N4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.41□□□□□ -0.1
Zfp248Q640N4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Zfp248Q640N4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Zfp248Q640N4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.41□□□□□ -0.1
Zfp248Q640N4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Zfp248Q640N4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Zfp248Q640N4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Zfp248Q640N4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Zfp248Q640N4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Zfp248Q640N4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Zfp248Q640N4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.4□□□□□ -0.1
Zfp248Q640N4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zfp248Q640N4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zfp248Q640N4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zfp248Q640N4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zfp248Q640N4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zfp248Q640N4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.4□□□□□ -0.1
Zfp248Q640N4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Zfp248Q640N4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms