Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ss18Q62280 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ss18Q62280 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ss18Q62280 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.04□□□□□ -0.16
Ss18Q62280 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
Ss18Q62280 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ss18Q62280 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ss18Q62280 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ss18Q62280 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ss18Q62280 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ss18Q62280 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ss18Q62280 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Ss18Q62280 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ss18Q62280 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ss18Q62280 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ss18Q62280 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ss18Q62280 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.03□□□□□ -0.16
Ss18Q62280 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ss18Q62280 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ss18Q62280 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ss18Q62280 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.03□□□□□ -0.16
Ss18Q62280 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.03□□□□□ -0.16
Ss18Q62280 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ss18Q62280 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ss18Q62280 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ss18Q62280 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ss18Q62280 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ss18Q62280 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ss18Q62280 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ss18Q62280 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ss18Q62280 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.02□□□□□ -0.16
Ss18Q62280 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ss18Q62280 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ss18Q62280 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ss18Q62280 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.02□□□□□ -0.17
Ss18Q62280 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ss18Q62280 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Ss18Q62280 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ss18Q62280 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ss18Q62280 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ss18Q62280 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.01□□□□□ -0.17
Ss18Q62280 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ss18Q62280 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ss18Q62280 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ss18Q62280 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ss18Q62280 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ss18Q62280 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ss18Q62280 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.01□□□□□ -0.17
Ss18Q62280 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.01□□□□□ -0.17
Ss18Q62280 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ss18Q62280 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ss18Q62280 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ss18Q62280 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ss18Q62280 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ss18Q62280 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ss18Q62280 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ss18Q62280 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ss18Q62280 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ss18Q62280 Gm27045-201ENSMUST00000182145 1402 ntBASIC14□□□□□ -0.17
Ss18Q62280 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Ss18Q62280 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ss18Q62280 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14□□□□□ -0.17
Ss18Q62280 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ss18Q62280 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ss18Q62280 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ss18Q62280 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ss18Q62280 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ss18Q62280 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ss18Q62280 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ss18Q62280 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ss18Q62280 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ss18Q62280 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14□□□□□ -0.17
Ss18Q62280 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ss18Q62280 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ss18Q62280 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ss18Q62280 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ss18Q62280 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ss18Q62280 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ss18Q62280 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ss18Q62280 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ss18Q62280 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ss18Q62280 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ss18Q62280 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ss18Q62280 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ss18Q62280 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ss18Q62280 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ss18Q62280 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ss18Q62280 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ss18Q62280 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.99□□□□□ -0.17
Ss18Q62280 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ss18Q62280 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ss18Q62280 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ss18Q62280 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Ss18Q62280 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ss18Q62280 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ss18Q62280 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ss18Q62280 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ss18Q62280 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ss18Q62280 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ss18Q62280 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms