Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.86■□□□□ 0.13
SspnQ62147 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SspnQ62147 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.86■□□□□ 0.13
SspnQ62147 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SspnQ62147 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SspnQ62147 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SspnQ62147 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.86■□□□□ 0.13
SspnQ62147 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SspnQ62147 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SspnQ62147 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SspnQ62147 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SspnQ62147 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SspnQ62147 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SspnQ62147 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SspnQ62147 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SspnQ62147 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SspnQ62147 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SspnQ62147 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SspnQ62147 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SspnQ62147 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.85■□□□□ 0.13
SspnQ62147 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.85■□□□□ 0.13
SspnQ62147 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.85■□□□□ 0.13
SspnQ62147 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SspnQ62147 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SspnQ62147 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SspnQ62147 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SspnQ62147 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SspnQ62147 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SspnQ62147 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SspnQ62147 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SspnQ62147 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SspnQ62147 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SspnQ62147 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SspnQ62147 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SspnQ62147 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SspnQ62147 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SspnQ62147 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SspnQ62147 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.84■□□□□ 0.13
SspnQ62147 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SspnQ62147 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SspnQ62147 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SspnQ62147 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SspnQ62147 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.84■□□□□ 0.13
SspnQ62147 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SspnQ62147 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
SspnQ62147 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SspnQ62147 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
SspnQ62147 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SspnQ62147 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SspnQ62147 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
SspnQ62147 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SspnQ62147 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SspnQ62147 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SspnQ62147 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.83■□□□□ 0.12
SspnQ62147 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SspnQ62147 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.83■□□□□ 0.12
SspnQ62147 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SspnQ62147 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SspnQ62147 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.83■□□□□ 0.12
SspnQ62147 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SspnQ62147 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SspnQ62147 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SspnQ62147 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SspnQ62147 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SspnQ62147 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SspnQ62147 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SspnQ62147 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SspnQ62147 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SspnQ62147 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SspnQ62147 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SspnQ62147 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SspnQ62147 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SspnQ62147 Spcs1-204ENSMUST00000226782 949 ntBASIC15.82■□□□□ 0.12
SspnQ62147 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SspnQ62147 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SspnQ62147 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SspnQ62147 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SspnQ62147 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SspnQ62147 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SspnQ62147 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
SspnQ62147 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SspnQ62147 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SspnQ62147 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SspnQ62147 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SspnQ62147 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SspnQ62147 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SspnQ62147 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SspnQ62147 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SspnQ62147 Gm21956-201ENSMUST00000179946 522 ntBASIC15.81■□□□□ 0.12
SspnQ62147 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.81■□□□□ 0.12
SspnQ62147 Serp2-204ENSMUST00000228055 705 ntBASIC15.81■□□□□ 0.12
SspnQ62147 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SspnQ62147 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SspnQ62147 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SspnQ62147 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SspnQ62147 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SspnQ62147 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SspnQ62147 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SspnQ62147 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SspnQ62147 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms