Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Traf4Q61382 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Traf4Q61382 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Traf4Q61382 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Traf4Q61382 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Traf4Q61382 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Traf4Q61382 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Traf4Q61382 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Traf4Q61382 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.79■□□□□ 0.28
Traf4Q61382 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Traf4Q61382 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Traf4Q61382 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Traf4Q61382 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Traf4Q61382 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Traf4Q61382 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Traf4Q61382 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Traf4Q61382 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Traf4Q61382 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.79■□□□□ 0.28
Traf4Q61382 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Traf4Q61382 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.79■□□□□ 0.28
Traf4Q61382 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Traf4Q61382 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.78■□□□□ 0.28
Traf4Q61382 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Traf4Q61382 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Traf4Q61382 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Traf4Q61382 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.78■□□□□ 0.28
Traf4Q61382 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Traf4Q61382 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Traf4Q61382 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Traf4Q61382 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Traf4Q61382 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Traf4Q61382 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Traf4Q61382 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Traf4Q61382 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Traf4Q61382 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.77■□□□□ 0.28
Traf4Q61382 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Traf4Q61382 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Traf4Q61382 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Traf4Q61382 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Traf4Q61382 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Traf4Q61382 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Traf4Q61382 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.77■□□□□ 0.27
Traf4Q61382 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Traf4Q61382 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Traf4Q61382 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Traf4Q61382 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Traf4Q61382 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.76■□□□□ 0.27
Traf4Q61382 Gm18671-201ENSMUST00000214826 683 ntBASIC16.76■□□□□ 0.27
Traf4Q61382 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.76■□□□□ 0.27
Traf4Q61382 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.76■□□□□ 0.27
Traf4Q61382 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Traf4Q61382 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Traf4Q61382 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Traf4Q61382 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.76■□□□□ 0.27
Traf4Q61382 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Traf4Q61382 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.76■□□□□ 0.27
Traf4Q61382 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Traf4Q61382 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Traf4Q61382 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Traf4Q61382 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Traf4Q61382 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Traf4Q61382 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.75■□□□□ 0.27
Traf4Q61382 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Traf4Q61382 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.75■□□□□ 0.27
Traf4Q61382 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Traf4Q61382 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Traf4Q61382 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.75■□□□□ 0.27
Traf4Q61382 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Traf4Q61382 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Traf4Q61382 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Traf4Q61382 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Traf4Q61382 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Traf4Q61382 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Traf4Q61382 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Traf4Q61382 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Traf4Q61382 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Traf4Q61382 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Traf4Q61382 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.74■□□□□ 0.27
Traf4Q61382 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.74■□□□□ 0.27
Traf4Q61382 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Traf4Q61382 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Traf4Q61382 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Traf4Q61382 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Traf4Q61382 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Traf4Q61382 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Traf4Q61382 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Traf4Q61382 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Traf4Q61382 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Traf4Q61382 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Traf4Q61382 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Traf4Q61382 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Traf4Q61382 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Traf4Q61382 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Traf4Q61382 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Traf4Q61382 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Traf4Q61382 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Traf4Q61382 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Traf4Q61382 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.73■□□□□ 0.27
Traf4Q61382 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Traf4Q61382 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms