Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gm9987-201ENSMUST00000069768 567 ntBASIC23.55■■□□□ 1.36
Ubr3Q5U430 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ubr3Q5U430 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ubr3Q5U430 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
Ubr3Q5U430 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ubr3Q5U430 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
Ubr3Q5U430 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Ubr3Q5U430 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC23.54■■□□□ 1.36
Ubr3Q5U430 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ubr3Q5U430 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC23.54■■□□□ 1.36
Ubr3Q5U430 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ubr3Q5U430 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr3Q5U430 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr3Q5U430 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr3Q5U430 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr3Q5U430 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Ubr3Q5U430 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr3Q5U430 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Ubr3Q5U430 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr3Q5U430 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr3Q5U430 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr3Q5U430 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr3Q5U430 Gm32699-201ENSMUST00000221728 1988 ntBASIC23.52■■□□□ 1.36
Ubr3Q5U430 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ubr3Q5U430 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ubr3Q5U430 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ubr3Q5U430 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ubr3Q5U430 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Ubr3Q5U430 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ubr3Q5U430 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ubr3Q5U430 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC23.51■■□□□ 1.35
Ubr3Q5U430 Alkbh1-212ENSMUST00000185301 408 ntBASIC23.51■■□□□ 1.35
Ubr3Q5U430 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ubr3Q5U430 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ubr3Q5U430 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ubr3Q5U430 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ubr3Q5U430 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
Ubr3Q5U430 Gm10231-201ENSMUST00000181584 441 ntBASIC23.51■■□□□ 1.35
Ubr3Q5U430 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ubr3Q5U430 Gm10175-202ENSMUST00000208752 441 ntBASIC23.51■■□□□ 1.35
Ubr3Q5U430 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ubr3Q5U430 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ubr3Q5U430 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Ubr3Q5U430 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ubr3Q5U430 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC23.5■■□□□ 1.35
Ubr3Q5U430 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.5■■□□□ 1.35
Ubr3Q5U430 H2-K2-201ENSMUST00000174250 1049 ntBASIC23.49■■□□□ 1.35
Ubr3Q5U430 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ubr3Q5U430 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ubr3Q5U430 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ubr3Q5U430 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Ubr3Q5U430 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC23.49■■□□□ 1.35
Ubr3Q5U430 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ubr3Q5U430 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ubr3Q5U430 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.49■■□□□ 1.35
Ubr3Q5U430 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ubr3Q5U430 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ubr3Q5U430 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC23.48■■□□□ 1.35
Ubr3Q5U430 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ubr3Q5U430 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ubr3Q5U430 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ubr3Q5U430 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ubr3Q5U430 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
Ubr3Q5U430 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ubr3Q5U430 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Ubr3Q5U430 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC23.47■■□□□ 1.35
Ubr3Q5U430 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ubr3Q5U430 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ubr3Q5U430 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC23.47■■□□□ 1.35
Ubr3Q5U430 Wnt10b-205ENSMUST00000226846 1204 ntBASIC23.47■■□□□ 1.35
Ubr3Q5U430 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC23.47■■□□□ 1.35
Ubr3Q5U430 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
Ubr3Q5U430 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.46■■□□□ 1.35
Ubr3Q5U430 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.46■■□□□ 1.35
Ubr3Q5U430 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr3Q5U430 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr3Q5U430 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr3Q5U430 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr3Q5U430 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr3Q5U430 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr3Q5U430 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr3Q5U430 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Ubr3Q5U430 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC23.45■■□□□ 1.35
Ubr3Q5U430 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Ubr3Q5U430 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Ubr3Q5U430 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Ubr3Q5U430 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ubr3Q5U430 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Ubr3Q5U430 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ubr3Q5U430 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Ubr3Q5U430 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Ubr3Q5U430 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ubr3Q5U430 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC23.45■■□□□ 1.34
Ubr3Q5U430 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ubr3Q5U430 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ubr3Q5U430 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ubr3Q5U430 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Ubr3Q5U430 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ubr3Q5U430 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Ubr3Q5U430 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC23.44■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms