Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.82□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.82□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms