Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav3-3Q5R1C3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3-3Q5R1C3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
Trav3-3Q5R1C3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-3Q5R1C3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-3Q5R1C3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-3Q5R1C3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-3Q5R1C3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-3Q5R1C3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-3Q5R1C3 Mir6538-201ENSMUST00000183713 110 ntBASIC14.26□□□□□ -0.13
Trav3-3Q5R1C3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.26□□□□□ -0.13
Trav3-3Q5R1C3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-3Q5R1C3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-3Q5R1C3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav3-3Q5R1C3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-3Q5R1C3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-3Q5R1C3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav3-3Q5R1C3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-3Q5R1C3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav3-3Q5R1C3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-3Q5R1C3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-3Q5R1C3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-3Q5R1C3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-3Q5R1C3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-3Q5R1C3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav3-3Q5R1C3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav3-3Q5R1C3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav3-3Q5R1C3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav3-3Q5R1C3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-3Q5R1C3 BC021767-201ENSMUST00000126387 1716 ntBASIC14.23□□□□□ -0.13
Trav3-3Q5R1C3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-3Q5R1C3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-3Q5R1C3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-3Q5R1C3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-3Q5R1C3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-3Q5R1C3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-3Q5R1C3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav3-3Q5R1C3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-3Q5R1C3 Gm10420-201ENSMUST00000121713 882 ntBASIC14.22□□□□□ -0.13
Trav3-3Q5R1C3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-3Q5R1C3 Gm27502-201ENSMUST00000183495 199 ntBASIC14.22□□□□□ -0.13
Trav3-3Q5R1C3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-3Q5R1C3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-3Q5R1C3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-3Q5R1C3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-3Q5R1C3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-3Q5R1C3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-3Q5R1C3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-3Q5R1C3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3-3Q5R1C3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3-3Q5R1C3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3-3Q5R1C3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3-3Q5R1C3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC14.21□□□□□ -0.13
Trav3-3Q5R1C3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav3-3Q5R1C3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav3-3Q5R1C3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav3-3Q5R1C3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav3-3Q5R1C3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav3-3Q5R1C3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms