Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trdv2-2Q5R1A4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 Rarb-207ENSMUST00000225921 2756 ntBASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdv2-2Q5R1A4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdv2-2Q5R1A4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trdv2-2Q5R1A4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trdv2-2Q5R1A4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trdv2-2Q5R1A4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trdv2-2Q5R1A4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.53□□□□□ -0.08
Trdv2-2Q5R1A4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trdv2-2Q5R1A4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trdv2-2Q5R1A4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trdv2-2Q5R1A4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.53□□□□□ -0.08
Trdv2-2Q5R1A4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trdv2-2Q5R1A4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trdv2-2Q5R1A4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trdv2-2Q5R1A4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Trdv2-2Q5R1A4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trdv2-2Q5R1A4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trdv2-2Q5R1A4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trdv2-2Q5R1A4 AA386476-201ENSMUST00000098781 1665 ntBASIC14.52□□□□□ -0.08
Trdv2-2Q5R1A4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Trdv2-2Q5R1A4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trdv2-2Q5R1A4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trdv2-2Q5R1A4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trdv2-2Q5R1A4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Trdv2-2Q5R1A4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trdv2-2Q5R1A4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trdv2-2Q5R1A4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trdv2-2Q5R1A4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.52□□□□□ -0.09
Trdv2-2Q5R1A4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trdv2-2Q5R1A4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trdv2-2Q5R1A4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trdv2-2Q5R1A4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trdv2-2Q5R1A4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trdv2-2Q5R1A4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trdv2-2Q5R1A4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trdv2-2Q5R1A4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.51□□□□□ -0.09
Trdv2-2Q5R1A4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.51□□□□□ -0.09
Trdv2-2Q5R1A4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trdv2-2Q5R1A4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trdv2-2Q5R1A4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.51□□□□□ -0.09
Trdv2-2Q5R1A4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Trdv2-2Q5R1A4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trdv2-2Q5R1A4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trdv2-2Q5R1A4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trdv2-2Q5R1A4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trdv2-2Q5R1A4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms