Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps41Q5KU39 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps41Q5KU39 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Vps41Q5KU39 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps41Q5KU39 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps41Q5KU39 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Vps41Q5KU39 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps41Q5KU39 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps41Q5KU39 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps41Q5KU39 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Vps41Q5KU39 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vps41Q5KU39 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps41Q5KU39 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps41Q5KU39 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.82■□□□□ 0.76
Vps41Q5KU39 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vps41Q5KU39 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps41Q5KU39 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps41Q5KU39 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.81■□□□□ 0.76
Vps41Q5KU39 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps41Q5KU39 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.81■□□□□ 0.76
Vps41Q5KU39 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.81■□□□□ 0.76
Vps41Q5KU39 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.81■□□□□ 0.76
Vps41Q5KU39 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.81■□□□□ 0.76
Vps41Q5KU39 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps41Q5KU39 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps41Q5KU39 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps41Q5KU39 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps41Q5KU39 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
Vps41Q5KU39 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps41Q5KU39 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps41Q5KU39 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps41Q5KU39 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.8■□□□□ 0.76
Vps41Q5KU39 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps41Q5KU39 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vps41Q5KU39 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vps41Q5KU39 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps41Q5KU39 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vps41Q5KU39 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps41Q5KU39 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps41Q5KU39 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Vps41Q5KU39 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.79■□□□□ 0.76
Vps41Q5KU39 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.79■□□□□ 0.76
Vps41Q5KU39 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps41Q5KU39 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Vps41Q5KU39 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.79■□□□□ 0.76
Vps41Q5KU39 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps41Q5KU39 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps41Q5KU39 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vps41Q5KU39 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps41Q5KU39 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps41Q5KU39 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps41Q5KU39 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps41Q5KU39 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.78■□□□□ 0.76
Vps41Q5KU39 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps41Q5KU39 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps41Q5KU39 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps41Q5KU39 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps41Q5KU39 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps41Q5KU39 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.77■□□□□ 0.76
Vps41Q5KU39 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps41Q5KU39 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps41Q5KU39 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vps41Q5KU39 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps41Q5KU39 Gm14117-201ENSMUST00000122417 843 ntBASIC19.77■□□□□ 0.76
Vps41Q5KU39 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.77■□□□□ 0.76
Vps41Q5KU39 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.77■□□□□ 0.76
Vps41Q5KU39 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Vps41Q5KU39 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps41Q5KU39 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Vps41Q5KU39 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps41Q5KU39 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
Vps41Q5KU39 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vps41Q5KU39 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vps41Q5KU39 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps41Q5KU39 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps41Q5KU39 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Vps41Q5KU39 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.76■□□□□ 0.75
Vps41Q5KU39 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps41Q5KU39 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Vps41Q5KU39 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps41Q5KU39 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.76■□□□□ 0.75
Vps41Q5KU39 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.76■□□□□ 0.75
Vps41Q5KU39 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
Vps41Q5KU39 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps41Q5KU39 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps41Q5KU39 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps41Q5KU39 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps41Q5KU39 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.75■□□□□ 0.75
Vps41Q5KU39 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps41Q5KU39 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps41Q5KU39 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps41Q5KU39 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps41Q5KU39 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps41Q5KU39 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps41Q5KU39 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps41Q5KU39 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Vps41Q5KU39 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps41Q5KU39 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps41Q5KU39 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps41Q5KU39 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms