Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Defb28Q3V2L0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Defb28Q3V2L0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Defb28Q3V2L0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Defb28Q3V2L0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Defb28Q3V2L0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Defb28Q3V2L0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Defb28Q3V2L0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Defb28Q3V2L0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Defb28Q3V2L0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.43■□□□□ 0.54
Defb28Q3V2L0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Defb28Q3V2L0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Defb28Q3V2L0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Defb28Q3V2L0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.43■□□□□ 0.54
Defb28Q3V2L0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Defb28Q3V2L0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Defb28Q3V2L0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.43■□□□□ 0.54
Defb28Q3V2L0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.43■□□□□ 0.54
Defb28Q3V2L0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Defb28Q3V2L0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.43■□□□□ 0.54
Defb28Q3V2L0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Defb28Q3V2L0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Defb28Q3V2L0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Defb28Q3V2L0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Defb28Q3V2L0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Defb28Q3V2L0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Defb28Q3V2L0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Defb28Q3V2L0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Defb28Q3V2L0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Defb28Q3V2L0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Defb28Q3V2L0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Defb28Q3V2L0 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.42■□□□□ 0.54
Defb28Q3V2L0 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.42■□□□□ 0.54
Defb28Q3V2L0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Defb28Q3V2L0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Defb28Q3V2L0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Defb28Q3V2L0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.42■□□□□ 0.54
Defb28Q3V2L0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Defb28Q3V2L0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Defb28Q3V2L0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Defb28Q3V2L0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Defb28Q3V2L0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Defb28Q3V2L0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Defb28Q3V2L0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Defb28Q3V2L0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Defb28Q3V2L0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Defb28Q3V2L0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Defb28Q3V2L0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Defb28Q3V2L0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.41■□□□□ 0.54
Defb28Q3V2L0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Defb28Q3V2L0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Defb28Q3V2L0 Gm13158-201ENSMUST00000122007 736 ntBASIC18.41■□□□□ 0.54
Defb28Q3V2L0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.41■□□□□ 0.54
Defb28Q3V2L0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Defb28Q3V2L0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Defb28Q3V2L0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Defb28Q3V2L0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Defb28Q3V2L0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Defb28Q3V2L0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Defb28Q3V2L0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Defb28Q3V2L0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Defb28Q3V2L0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Defb28Q3V2L0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Defb28Q3V2L0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Defb28Q3V2L0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Defb28Q3V2L0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Defb28Q3V2L0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Defb28Q3V2L0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Defb28Q3V2L0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.4■□□□□ 0.54
Defb28Q3V2L0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Defb28Q3V2L0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.4■□□□□ 0.54
Defb28Q3V2L0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Defb28Q3V2L0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Defb28Q3V2L0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Defb28Q3V2L0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Defb28Q3V2L0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Defb28Q3V2L0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Defb28Q3V2L0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Defb28Q3V2L0 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.39■□□□□ 0.53
Defb28Q3V2L0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Defb28Q3V2L0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Defb28Q3V2L0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Defb28Q3V2L0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Defb28Q3V2L0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Defb28Q3V2L0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Defb28Q3V2L0 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.39■□□□□ 0.53
Defb28Q3V2L0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Defb28Q3V2L0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Defb28Q3V2L0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Defb28Q3V2L0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Defb28Q3V2L0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Defb28Q3V2L0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Defb28Q3V2L0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Defb28Q3V2L0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Defb28Q3V2L0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.38■□□□□ 0.53
Defb28Q3V2L0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Defb28Q3V2L0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Defb28Q3V2L0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Defb28Q3V2L0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.38■□□□□ 0.53
Defb28Q3V2L0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms