Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim6Q3U0I6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim6Q3U0I6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim6Q3U0I6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim6Q3U0I6 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.84□□□□□ -0.03
Smim6Q3U0I6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smim6Q3U0I6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smim6Q3U0I6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Smim6Q3U0I6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smim6Q3U0I6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smim6Q3U0I6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smim6Q3U0I6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim6Q3U0I6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Smim6Q3U0I6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Smim6Q3U0I6 Gm43530-201ENSMUST00000195920 274 ntBASIC14.83□□□□□ -0.04
Smim6Q3U0I6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim6Q3U0I6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim6Q3U0I6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim6Q3U0I6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smim6Q3U0I6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim6Q3U0I6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim6Q3U0I6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim6Q3U0I6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim6Q3U0I6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim6Q3U0I6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
Smim6Q3U0I6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim6Q3U0I6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim6Q3U0I6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim6Q3U0I6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.81□□□□□ -0.04
Smim6Q3U0I6 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim6Q3U0I6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Gm8969-201ENSMUST00000199694 526 ntBASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim6Q3U0I6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smim6Q3U0I6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smim6Q3U0I6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Smim6Q3U0I6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smim6Q3U0I6 Gm7332-201ENSMUST00000118351 454 ntBASIC14.79□□□□□ -0.04
Smim6Q3U0I6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smim6Q3U0I6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smim6Q3U0I6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Smim6Q3U0I6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smim6Q3U0I6 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.79□□□□□ -0.04
Smim6Q3U0I6 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.79□□□□□ -0.04
Smim6Q3U0I6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms