Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.17■□□□□ 0.18
Fndc4Q3TR08 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.17■□□□□ 0.18
Fndc4Q3TR08 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fndc4Q3TR08 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fndc4Q3TR08 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fndc4Q3TR08 Gm13241-201ENSMUST00000094493 780 ntBASIC16.17■□□□□ 0.18
Fndc4Q3TR08 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fndc4Q3TR08 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fndc4Q3TR08 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Fndc4Q3TR08 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fndc4Q3TR08 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Fndc4Q3TR08 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fndc4Q3TR08 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.17■□□□□ 0.18
Fndc4Q3TR08 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fndc4Q3TR08 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.16■□□□□ 0.18
Fndc4Q3TR08 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fndc4Q3TR08 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Fndc4Q3TR08 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fndc4Q3TR08 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fndc4Q3TR08 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Fndc4Q3TR08 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Fndc4Q3TR08 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fndc4Q3TR08 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fndc4Q3TR08 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fndc4Q3TR08 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fndc4Q3TR08 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fndc4Q3TR08 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fndc4Q3TR08 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Fndc4Q3TR08 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Fndc4Q3TR08 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.15■□□□□ 0.18
Fndc4Q3TR08 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.15■□□□□ 0.18
Fndc4Q3TR08 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Fndc4Q3TR08 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Fndc4Q3TR08 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Fndc4Q3TR08 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fndc4Q3TR08 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fndc4Q3TR08 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fndc4Q3TR08 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fndc4Q3TR08 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.14■□□□□ 0.17
Fndc4Q3TR08 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.14■□□□□ 0.17
Fndc4Q3TR08 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fndc4Q3TR08 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fndc4Q3TR08 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Fndc4Q3TR08 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Fndc4Q3TR08 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Fndc4Q3TR08 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fndc4Q3TR08 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fndc4Q3TR08 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fndc4Q3TR08 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Fndc4Q3TR08 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Fndc4Q3TR08 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Fndc4Q3TR08 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fndc4Q3TR08 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fndc4Q3TR08 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fndc4Q3TR08 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fndc4Q3TR08 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Fndc4Q3TR08 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Fndc4Q3TR08 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fndc4Q3TR08 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fndc4Q3TR08 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.13■□□□□ 0.17
Fndc4Q3TR08 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Fndc4Q3TR08 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Fndc4Q3TR08 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.12■□□□□ 0.17
Fndc4Q3TR08 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.12■□□□□ 0.17
Fndc4Q3TR08 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fndc4Q3TR08 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fndc4Q3TR08 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fndc4Q3TR08 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fndc4Q3TR08 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fndc4Q3TR08 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.12■□□□□ 0.17
Fndc4Q3TR08 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Fndc4Q3TR08 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.12■□□□□ 0.17
Fndc4Q3TR08 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.12■□□□□ 0.17
Fndc4Q3TR08 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fndc4Q3TR08 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Fndc4Q3TR08 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Fndc4Q3TR08 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Fndc4Q3TR08 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Fndc4Q3TR08 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Fndc4Q3TR08 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Fndc4Q3TR08 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms