Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Q3KNL4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Q3KNL4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q3KNL4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Q3KNL4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Q3KNL4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.69■□□□□ 0.58
Q3KNL4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Q3KNL4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q3KNL4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q3KNL4 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.69■□□□□ 0.58
Q3KNL4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q3KNL4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.69■□□□□ 0.58
Q3KNL4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q3KNL4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Q3KNL4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Q3KNL4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Q3KNL4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q3KNL4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Q3KNL4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q3KNL4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q3KNL4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q3KNL4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Q3KNL4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Q3KNL4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Q3KNL4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q3KNL4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q3KNL4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q3KNL4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q3KNL4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q3KNL4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.68■□□□□ 0.58
Q3KNL4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q3KNL4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q3KNL4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.67■□□□□ 0.58
Q3KNL4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Q3KNL4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q3KNL4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q3KNL4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Q3KNL4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q3KNL4 Gm9847-201ENSMUST00000052528 599 ntBASIC18.67■□□□□ 0.58
Q3KNL4 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.67■□□□□ 0.58
Q3KNL4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q3KNL4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Q3KNL4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q3KNL4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Q3KNL4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q3KNL4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Q3KNL4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q3KNL4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3KNL4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Q3KNL4 Golph3-205ENSMUST00000228671 2842 ntBASIC18.66■□□□□ 0.58
Q3KNL4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3KNL4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3KNL4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3KNL4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Q3KNL4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.66■□□□□ 0.58
Q3KNL4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3KNL4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3KNL4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3KNL4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3KNL4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Q3KNL4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3KNL4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3KNL4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Q3KNL4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
Q3KNL4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Q3KNL4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.65■□□□□ 0.58
Q3KNL4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q3KNL4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q3KNL4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q3KNL4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Q3KNL4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.65■□□□□ 0.58
Q3KNL4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Q3KNL4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.65■□□□□ 0.58
Q3KNL4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Q3KNL4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Q3KNL4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.64■□□□□ 0.57
Q3KNL4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Q3KNL4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q3KNL4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.64■□□□□ 0.57
Q3KNL4 Serp2-204ENSMUST00000228055 705 ntBASIC18.64■□□□□ 0.57
Q3KNL4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Q3KNL4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q3KNL4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q3KNL4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q3KNL4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q3KNL4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q3KNL4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Q3KNL4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Q3KNL4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Q3KNL4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q3KNL4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Q3KNL4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Q3KNL4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Q3KNL4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Q3KNL4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q3KNL4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q3KNL4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q3KNL4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q3KNL4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q3KNL4 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms