Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sox4Q06831 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Sox4Q06831 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sox4Q06831 Gm13146-201ENSMUST00000118508 780 ntBASIC18.72■□□□□ 0.59
Sox4Q06831 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.72■□□□□ 0.59
Sox4Q06831 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.72■□□□□ 0.59
Sox4Q06831 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sox4Q06831 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox4Q06831 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox4Q06831 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox4Q06831 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox4Q06831 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox4Q06831 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sox4Q06831 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Sox4Q06831 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox4Q06831 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox4Q06831 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.71■□□□□ 0.59
Sox4Q06831 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sox4Q06831 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox4Q06831 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
Sox4Q06831 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Sox4Q06831 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Sox4Q06831 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox4Q06831 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox4Q06831 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox4Q06831 Gm27405-201ENSMUST00000184201 112 ntBASIC18.7■□□□□ 0.58
Sox4Q06831 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.7■□□□□ 0.58
Sox4Q06831 Gm7291-201ENSMUST00000199147 382 ntBASIC18.7■□□□□ 0.58
Sox4Q06831 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Sox4Q06831 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox4Q06831 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox4Q06831 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox4Q06831 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox4Q06831 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox4Q06831 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox4Q06831 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox4Q06831 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.69■□□□□ 0.58
Sox4Q06831 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Sox4Q06831 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.69■□□□□ 0.58
Sox4Q06831 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox4Q06831 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox4Q06831 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Sox4Q06831 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox4Q06831 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox4Q06831 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sox4Q06831 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox4Q06831 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox4Q06831 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Sox4Q06831 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Sox4Q06831 Gm7514-201ENSMUST00000209475 934 ntBASIC18.68■□□□□ 0.58
Sox4Q06831 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox4Q06831 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.68■□□□□ 0.58
Sox4Q06831 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox4Q06831 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox4Q06831 Golph3-202ENSMUST00000226517 2359 ntBASIC18.68■□□□□ 0.58
Sox4Q06831 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Sox4Q06831 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox4Q06831 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox4Q06831 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.67■□□□□ 0.58
Sox4Q06831 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Sox4Q06831 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox4Q06831 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox4Q06831 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sox4Q06831 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Sox4Q06831 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.67■□□□□ 0.58
Sox4Q06831 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sox4Q06831 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.67■□□□□ 0.58
Sox4Q06831 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox4Q06831 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox4Q06831 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox4Q06831 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox4Q06831 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox4Q06831 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox4Q06831 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox4Q06831 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox4Q06831 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox4Q06831 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox4Q06831 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.66■□□□□ 0.58
Sox4Q06831 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox4Q06831 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox4Q06831 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox4Q06831 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox4Q06831 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox4Q06831 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Sox4Q06831 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox4Q06831 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox4Q06831 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox4Q06831 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox4Q06831 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox4Q06831 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox4Q06831 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox4Q06831 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox4Q06831 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox4Q06831 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sox4Q06831 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox4Q06831 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox4Q06831 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sox4Q06831 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Sox4Q06831 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.65■□□□□ 0.58
Sox4Q06831 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms