Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.26□□□□□ -0.13
Hspg2Q05793 Gm9987-201ENSMUST00000069768 567 ntBASIC14.26□□□□□ -0.13
Hspg2Q05793 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hspg2Q05793 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hspg2Q05793 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hspg2Q05793 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.25□□□□□ -0.13
Hspg2Q05793 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hspg2Q05793 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hspg2Q05793 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hspg2Q05793 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Hspg2Q05793 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hspg2Q05793 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hspg2Q05793 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hspg2Q05793 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.25□□□□□ -0.13
Hspg2Q05793 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hspg2Q05793 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.25□□□□□ -0.13
Hspg2Q05793 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hspg2Q05793 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hspg2Q05793 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hspg2Q05793 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hspg2Q05793 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hspg2Q05793 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hspg2Q05793 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.25□□□□□ -0.13
Hspg2Q05793 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hspg2Q05793 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hspg2Q05793 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.24□□□□□ -0.13
Hspg2Q05793 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.24□□□□□ -0.13
Hspg2Q05793 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.24□□□□□ -0.13
Hspg2Q05793 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hspg2Q05793 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.24□□□□□ -0.13
Hspg2Q05793 Gm27741-201ENSMUST00000185060 237 ntBASIC14.24□□□□□ -0.13
Hspg2Q05793 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hspg2Q05793 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.24□□□□□ -0.13
Hspg2Q05793 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hspg2Q05793 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hspg2Q05793 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.23□□□□□ -0.13
Hspg2Q05793 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hspg2Q05793 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hspg2Q05793 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hspg2Q05793 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hspg2Q05793 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.23□□□□□ -0.13
Hspg2Q05793 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.23□□□□□ -0.13
Hspg2Q05793 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.23□□□□□ -0.13
Hspg2Q05793 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.23□□□□□ -0.13
Hspg2Q05793 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hspg2Q05793 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hspg2Q05793 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hspg2Q05793 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hspg2Q05793 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hspg2Q05793 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hspg2Q05793 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hspg2Q05793 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hspg2Q05793 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.23□□□□□ -0.13
Hspg2Q05793 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hspg2Q05793 Gm10698-201ENSMUST00000182663 604 ntBASIC14.23□□□□□ -0.13
Hspg2Q05793 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hspg2Q05793 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hspg2Q05793 Mir5122-201ENSMUST00000175004 89 ntBASIC14.22□□□□□ -0.13
Hspg2Q05793 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.22□□□□□ -0.13
Hspg2Q05793 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hspg2Q05793 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hspg2Q05793 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hspg2Q05793 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hspg2Q05793 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hspg2Q05793 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.22□□□□□ -0.13
Hspg2Q05793 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hspg2Q05793 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hspg2Q05793 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.21□□□□□ -0.13
Hspg2Q05793 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hspg2Q05793 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.21□□□□□ -0.13
Hspg2Q05793 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hspg2Q05793 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hspg2Q05793 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hspg2Q05793 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hspg2Q05793 Dio3-201ENSMUST00000097228 1449 ntBASIC14.21□□□□□ -0.13
Hspg2Q05793 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hspg2Q05793 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hspg2Q05793 Gm10517-202ENSMUST00000192970 758 ntBASIC14.21□□□□□ -0.13
Hspg2Q05793 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hspg2Q05793 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Hspg2Q05793 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hspg2Q05793 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hspg2Q05793 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hspg2Q05793 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.2□□□□□ -0.14
Hspg2Q05793 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Hspg2Q05793 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hspg2Q05793 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hspg2Q05793 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hspg2Q05793 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hspg2Q05793 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hspg2Q05793 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.2□□□□□ -0.14
Hspg2Q05793 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hspg2Q05793 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hspg2Q05793 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hspg2Q05793 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hspg2Q05793 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hspg2Q05793 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.2□□□□□ -0.14
Hspg2Q05793 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.2□□□□□ -0.14
Hspg2Q05793 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hspg2Q05793 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms