Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sox9Q04887 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox9Q04887 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox9Q04887 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox9Q04887 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.76■□□□□ 0.75
Sox9Q04887 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox9Q04887 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sox9Q04887 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.76■□□□□ 0.75
Sox9Q04887 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox9Q04887 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sox9Q04887 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sox9Q04887 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox9Q04887 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Sox9Q04887 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox9Q04887 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox9Q04887 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox9Q04887 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox9Q04887 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.75■□□□□ 0.75
Sox9Q04887 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.75■□□□□ 0.75
Sox9Q04887 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.75■□□□□ 0.75
Sox9Q04887 Gm7367-201ENSMUST00000057611 492 ntBASIC19.75■□□□□ 0.75
Sox9Q04887 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.75■□□□□ 0.75
Sox9Q04887 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox9Q04887 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.75■□□□□ 0.75
Sox9Q04887 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox9Q04887 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox9Q04887 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox9Q04887 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sox9Q04887 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox9Q04887 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox9Q04887 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Sox9Q04887 Gm7860-201ENSMUST00000121190 879 ntBASIC19.74■□□□□ 0.75
Sox9Q04887 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.74■□□□□ 0.75
Sox9Q04887 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.74■□□□□ 0.75
Sox9Q04887 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Sox9Q04887 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.74■□□□□ 0.75
Sox9Q04887 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox9Q04887 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox9Q04887 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Sox9Q04887 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox9Q04887 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Sox9Q04887 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox9Q04887 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox9Q04887 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox9Q04887 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox9Q04887 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox9Q04887 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox9Q04887 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.73■□□□□ 0.75
Sox9Q04887 Mir5122-201ENSMUST00000175004 89 ntBASIC19.73■□□□□ 0.75
Sox9Q04887 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.73■□□□□ 0.75
Sox9Q04887 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox9Q04887 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox9Q04887 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox9Q04887 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.73■□□□□ 0.75
Sox9Q04887 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox9Q04887 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox9Q04887 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sox9Q04887 Gm2399-201ENSMUST00000104944 225 ntBASIC19.72■□□□□ 0.75
Sox9Q04887 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Sox9Q04887 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
Sox9Q04887 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox9Q04887 Gm44549-201ENSMUST00000208351 577 ntBASIC19.72■□□□□ 0.75
Sox9Q04887 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox9Q04887 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Sox9Q04887 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox9Q04887 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox9Q04887 Gm5417-201ENSMUST00000079706 384 ntBASIC19.71■□□□□ 0.75
Sox9Q04887 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox9Q04887 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sox9Q04887 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sox9Q04887 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sox9Q04887 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox9Q04887 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sox9Q04887 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox9Q04887 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.7■□□□□ 0.74
Sox9Q04887 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sox9Q04887 Gm27741-201ENSMUST00000185060 237 ntBASIC19.7■□□□□ 0.74
Sox9Q04887 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.7■□□□□ 0.74
Sox9Q04887 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox9Q04887 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sox9Q04887 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox9Q04887 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.69■□□□□ 0.74
Sox9Q04887 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.69■□□□□ 0.74
Sox9Q04887 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox9Q04887 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox9Q04887 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox9Q04887 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Sox9Q04887 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox9Q04887 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Sox9Q04887 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox9Q04887 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox9Q04887 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox9Q04887 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox9Q04887 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox9Q04887 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.68■□□□□ 0.74
Sox9Q04887 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.68■□□□□ 0.74
Sox9Q04887 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox9Q04887 Gm13158-201ENSMUST00000122007 736 ntBASIC19.68■□□□□ 0.74
Sox9Q04887 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Sox9Q04887 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms