Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lig3P97386 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lig3P97386 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lig3P97386 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.62■□□□□ 0.89
Lig3P97386 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lig3P97386 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.62■□□□□ 0.89
Lig3P97386 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lig3P97386 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lig3P97386 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lig3P97386 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Lig3P97386 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lig3P97386 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.61■□□□□ 0.89
Lig3P97386 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.61■□□□□ 0.89
Lig3P97386 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Lig3P97386 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.61■□□□□ 0.89
Lig3P97386 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lig3P97386 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Lig3P97386 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lig3P97386 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lig3P97386 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Lig3P97386 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lig3P97386 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.6■□□□□ 0.89
Lig3P97386 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lig3P97386 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lig3P97386 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lig3P97386 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lig3P97386 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Lig3P97386 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Lig3P97386 Mir5133-201ENSMUST00000174955 77 ntBASIC20.6■□□□□ 0.89
Lig3P97386 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lig3P97386 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Lig3P97386 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lig3P97386 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Lig3P97386 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lig3P97386 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lig3P97386 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.59■□□□□ 0.89
Lig3P97386 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lig3P97386 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lig3P97386 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lig3P97386 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lig3P97386 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Lig3P97386 Gm4968-201ENSMUST00000071458 858 ntBASIC20.59■□□□□ 0.89
Lig3P97386 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.59■□□□□ 0.89
Lig3P97386 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.59■□□□□ 0.89
Lig3P97386 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lig3P97386 Reep4-203ENSMUST00000226563 1444 ntBASIC20.59■□□□□ 0.89
Lig3P97386 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lig3P97386 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lig3P97386 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Lig3P97386 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lig3P97386 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lig3P97386 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Lig3P97386 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lig3P97386 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lig3P97386 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Lig3P97386 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Lig3P97386 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.58■□□□□ 0.89
Lig3P97386 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lig3P97386 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lig3P97386 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.58■□□□□ 0.88
Lig3P97386 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lig3P97386 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lig3P97386 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lig3P97386 Mir7071-201ENSMUST00000184847 69 ntBASIC20.57■□□□□ 0.88
Lig3P97386 Gm8520-201ENSMUST00000186517 868 ntBASIC20.57■□□□□ 0.88
Lig3P97386 Gm7514-201ENSMUST00000209475 934 ntBASIC20.57■□□□□ 0.88
Lig3P97386 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lig3P97386 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Lig3P97386 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lig3P97386 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.57■□□□□ 0.88
Lig3P97386 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lig3P97386 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lig3P97386 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lig3P97386 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lig3P97386 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lig3P97386 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lig3P97386 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lig3P97386 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.56■□□□□ 0.88
Lig3P97386 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lig3P97386 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lig3P97386 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lig3P97386 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lig3P97386 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Lig3P97386 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.56■□□□□ 0.88
Lig3P97386 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.56■□□□□ 0.88
Lig3P97386 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lig3P97386 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Lig3P97386 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Lig3P97386 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lig3P97386 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.56■□□□□ 0.88
Lig3P97386 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lig3P97386 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lig3P97386 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lig3P97386 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lig3P97386 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lig3P97386 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lig3P97386 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Lig3P97386 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.55■□□□□ 0.88
Lig3P97386 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lig3P97386 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms