Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PrkdcP97313 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PrkdcP97313 Gm13158-201ENSMUST00000122007 736 ntBASIC13.29□□□□□ -0.28
PrkdcP97313 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PrkdcP97313 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PrkdcP97313 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PrkdcP97313 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PrkdcP97313 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PrkdcP97313 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.28□□□□□ -0.28
PrkdcP97313 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PrkdcP97313 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PrkdcP97313 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PrkdcP97313 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PrkdcP97313 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PrkdcP97313 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PrkdcP97313 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PrkdcP97313 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PrkdcP97313 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PrkdcP97313 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PrkdcP97313 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PrkdcP97313 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PrkdcP97313 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.28□□□□□ -0.28
PrkdcP97313 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PrkdcP97313 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PrkdcP97313 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.28□□□□□ -0.28
PrkdcP97313 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PrkdcP97313 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PrkdcP97313 Gm7860-201ENSMUST00000121190 879 ntBASIC13.28□□□□□ -0.28
PrkdcP97313 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PrkdcP97313 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PrkdcP97313 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
PrkdcP97313 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PrkdcP97313 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
PrkdcP97313 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PrkdcP97313 Gm33142-201ENSMUST00000193913 867 ntBASIC13.27□□□□□ -0.28
PrkdcP97313 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.27□□□□□ -0.28
PrkdcP97313 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PrkdcP97313 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PrkdcP97313 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PrkdcP97313 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PrkdcP97313 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PrkdcP97313 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.27□□□□□ -0.29
PrkdcP97313 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.27□□□□□ -0.29
PrkdcP97313 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PrkdcP97313 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PrkdcP97313 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.27□□□□□ -0.29
PrkdcP97313 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PrkdcP97313 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrkdcP97313 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
PrkdcP97313 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrkdcP97313 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrkdcP97313 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
PrkdcP97313 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PrkdcP97313 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrkdcP97313 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
PrkdcP97313 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrkdcP97313 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrkdcP97313 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrkdcP97313 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PrkdcP97313 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrkdcP97313 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
PrkdcP97313 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PrkdcP97313 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.26□□□□□ -0.29
PrkdcP97313 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PrkdcP97313 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PrkdcP97313 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PrkdcP97313 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
PrkdcP97313 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.25□□□□□ -0.29
PrkdcP97313 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PrkdcP97313 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PrkdcP97313 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC13.25□□□□□ -0.29
PrkdcP97313 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PrkdcP97313 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.24□□□□□ -0.29
PrkdcP97313 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PrkdcP97313 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC13.24□□□□□ -0.29
PrkdcP97313 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PrkdcP97313 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PrkdcP97313 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PrkdcP97313 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PrkdcP97313 AC122428.2-201ENSMUST00000216321 1832 ntBASIC13.23□□□□□ -0.29
PrkdcP97313 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PrkdcP97313 AA414768-201ENSMUST00000121924 1257 ntBASIC13.23□□□□□ -0.29
PrkdcP97313 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PrkdcP97313 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PrkdcP97313 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PrkdcP97313 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PrkdcP97313 Gm10013-201ENSMUST00000106074 672 ntBASIC13.23□□□□□ -0.29
PrkdcP97313 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PrkdcP97313 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PrkdcP97313 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PrkdcP97313 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PrkdcP97313 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PrkdcP97313 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PrkdcP97313 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
PrkdcP97313 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PrkdcP97313 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.22□□□□□ -0.29
PrkdcP97313 Gm30025-201ENSMUST00000218555 728 ntBASIC13.22□□□□□ -0.29
PrkdcP97313 Gm5867-201ENSMUST00000063197 592 ntBASIC13.22□□□□□ -0.29
PrkdcP97313 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
PrkdcP97313 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms