Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubgcp3P58854 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubgcp3P58854 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubgcp3P58854 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubgcp3P58854 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubgcp3P58854 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubgcp3P58854 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubgcp3P58854 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tubgcp3P58854 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Tubgcp3P58854 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tubgcp3P58854 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tubgcp3P58854 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tubgcp3P58854 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.39■□□□□ 0.69
Tubgcp3P58854 Gm43017-201ENSMUST00000198296 752 ntBASIC19.39■□□□□ 0.69
Tubgcp3P58854 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Tubgcp3P58854 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tubgcp3P58854 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Tubgcp3P58854 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubgcp3P58854 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tubgcp3P58854 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.38■□□□□ 0.69
Tubgcp3P58854 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Tubgcp3P58854 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubgcp3P58854 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubgcp3P58854 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Tubgcp3P58854 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.38■□□□□ 0.69
Tubgcp3P58854 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubgcp3P58854 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tubgcp3P58854 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubgcp3P58854 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubgcp3P58854 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.38■□□□□ 0.69
Tubgcp3P58854 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubgcp3P58854 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Tubgcp3P58854 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubgcp3P58854 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubgcp3P58854 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubgcp3P58854 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubgcp3P58854 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubgcp3P58854 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubgcp3P58854 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubgcp3P58854 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.37■□□□□ 0.69
Tubgcp3P58854 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
Tubgcp3P58854 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubgcp3P58854 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Tubgcp3P58854 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubgcp3P58854 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubgcp3P58854 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tubgcp3P58854 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubgcp3P58854 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubgcp3P58854 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubgcp3P58854 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.37■□□□□ 0.69
Tubgcp3P58854 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tubgcp3P58854 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubgcp3P58854 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tubgcp3P58854 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tubgcp3P58854 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubgcp3P58854 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubgcp3P58854 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubgcp3P58854 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Tubgcp3P58854 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubgcp3P58854 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.36■□□□□ 0.69
Tubgcp3P58854 Gm26833-201ENSMUST00000180899 440 ntBASIC19.36■□□□□ 0.69
Tubgcp3P58854 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tubgcp3P58854 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubgcp3P58854 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubgcp3P58854 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.36■□□□□ 0.69
Tubgcp3P58854 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Tubgcp3P58854 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubgcp3P58854 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp3P58854 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Tubgcp3P58854 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp3P58854 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Tubgcp3P58854 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp3P58854 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.35■□□□□ 0.69
Tubgcp3P58854 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp3P58854 Gm40848-201ENSMUST00000221998 324 ntBASIC19.35■□□□□ 0.69
Tubgcp3P58854 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.35■□□□□ 0.69
Tubgcp3P58854 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Tubgcp3P58854 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Tubgcp3P58854 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp3P58854 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp3P58854 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.35■□□□□ 0.69
Tubgcp3P58854 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp3P58854 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp3P58854 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp3P58854 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp3P58854 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.34■□□□□ 0.69
Tubgcp3P58854 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Tubgcp3P58854 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tubgcp3P58854 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp3P58854 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Tubgcp3P58854 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp3P58854 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp3P58854 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp3P58854 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.34■□□□□ 0.69
Tubgcp3P58854 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp3P58854 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Tubgcp3P58854 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tubgcp3P58854 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Tubgcp3P58854 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.33■□□□□ 0.69
Tubgcp3P58854 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms