Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks2P56390 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks2P56390 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cks2P56390 Gm15546-201ENSMUST00000122095 826 ntBASIC15.9■□□□□ 0.14
Cks2P56390 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Cks2P56390 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks2P56390 Gm5812-201ENSMUST00000061073 957 ntBASIC15.9■□□□□ 0.14
Cks2P56390 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks2P56390 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks2P56390 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks2P56390 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks2P56390 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks2P56390 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.9■□□□□ 0.14
Cks2P56390 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks2P56390 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cks2P56390 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cks2P56390 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cks2P56390 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Cks2P56390 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cks2P56390 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cks2P56390 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.89■□□□□ 0.13
Cks2P56390 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.89■□□□□ 0.13
Cks2P56390 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cks2P56390 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cks2P56390 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cks2P56390 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cks2P56390 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cks2P56390 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cks2P56390 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Cks2P56390 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cks2P56390 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cks2P56390 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.88■□□□□ 0.13
Cks2P56390 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cks2P56390 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.88■□□□□ 0.13
Cks2P56390 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cks2P56390 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cks2P56390 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cks2P56390 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cks2P56390 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.88■□□□□ 0.13
Cks2P56390 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Cks2P56390 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cks2P56390 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cks2P56390 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cks2P56390 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks2P56390 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks2P56390 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cks2P56390 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks2P56390 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks2P56390 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.87■□□□□ 0.13
Cks2P56390 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks2P56390 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks2P56390 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks2P56390 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks2P56390 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks2P56390 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks2P56390 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks2P56390 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.86■□□□□ 0.13
Cks2P56390 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks2P56390 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks2P56390 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks2P56390 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks2P56390 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks2P56390 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks2P56390 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks2P56390 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.86■□□□□ 0.13
Cks2P56390 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks2P56390 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
Cks2P56390 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks2P56390 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks2P56390 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Cks2P56390 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cks2P56390 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cks2P56390 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.86■□□□□ 0.13
Cks2P56390 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cks2P56390 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks2P56390 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Cks2P56390 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cks2P56390 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cks2P56390 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cks2P56390 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.85■□□□□ 0.13
Cks2P56390 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cks2P56390 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cks2P56390 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cks2P56390 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cks2P56390 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cks2P56390 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.85■□□□□ 0.13
Cks2P56390 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cks2P56390 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cks2P56390 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cks2P56390 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cks2P56390 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Cks2P56390 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cks2P56390 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cks2P56390 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cks2P56390 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cks2P56390 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cks2P56390 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.84■□□□□ 0.13
Cks2P56390 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cks2P56390 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cks2P56390 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms