Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox1P53783 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox1P53783 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sox1P53783 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sox1P53783 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Sox1P53783 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sox1P53783 Gm23634-201ENSMUST00000175071 91 ntBASIC19.58■□□□□ 0.72
Sox1P53783 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sox1P53783 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sox1P53783 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sox1P53783 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sox1P53783 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sox1P53783 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sox1P53783 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sox1P53783 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
Sox1P53783 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox1P53783 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox1P53783 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sox1P53783 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox1P53783 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox1P53783 Gm6345-202ENSMUST00000180900 204 ntBASIC19.57■□□□□ 0.72
Sox1P53783 Gm33142-201ENSMUST00000193913 867 ntBASIC19.57■□□□□ 0.72
Sox1P53783 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox1P53783 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Sox1P53783 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox1P53783 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox1P53783 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sox1P53783 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Sox1P53783 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox1P53783 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sox1P53783 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox1P53783 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox1P53783 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox1P53783 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.56■□□□□ 0.72
Sox1P53783 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sox1P53783 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sox1P53783 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox1P53783 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Sox1P53783 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox1P53783 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox1P53783 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.56■□□□□ 0.72
Sox1P53783 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Sox1P53783 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox1P53783 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sox1P53783 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox1P53783 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.55■□□□□ 0.72
Sox1P53783 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox1P53783 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.55■□□□□ 0.72
Sox1P53783 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox1P53783 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox1P53783 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox1P53783 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.54■□□□□ 0.72
Sox1P53783 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sox1P53783 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox1P53783 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sox1P53783 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Sox1P53783 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox1P53783 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.54■□□□□ 0.72
Sox1P53783 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox1P53783 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Sox1P53783 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox1P53783 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Sox1P53783 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox1P53783 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.54■□□□□ 0.72
Sox1P53783 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox1P53783 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox1P53783 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox1P53783 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox1P53783 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox1P53783 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Sox1P53783 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.53■□□□□ 0.72
Sox1P53783 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox1P53783 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox1P53783 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox1P53783 Gm21814-202ENSMUST00000203277 873 ntBASIC19.53■□□□□ 0.72
Sox1P53783 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.53■□□□□ 0.72
Sox1P53783 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Sox1P53783 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Sox1P53783 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox1P53783 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Sox1P53783 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox1P53783 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sox1P53783 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox1P53783 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox1P53783 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Sox1P53783 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox1P53783 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox1P53783 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox1P53783 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.52■□□□□ 0.72
Sox1P53783 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Sox1P53783 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.52■□□□□ 0.72
Sox1P53783 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox1P53783 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox1P53783 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox1P53783 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.52■□□□□ 0.72
Sox1P53783 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sox1P53783 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Sox1P53783 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox1P53783 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox1P53783 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms