Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
Lhx3P50481 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx3P50481 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Lhx3P50481 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx3P50481 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx3P50481 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx3P50481 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx3P50481 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx3P50481 Notumos-201ENSMUST00000151998 2659 ntBASIC19.38■□□□□ 0.69
Lhx3P50481 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx3P50481 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Lhx3P50481 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx3P50481 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.38■□□□□ 0.69
Lhx3P50481 Gm37179-201ENSMUST00000194862 823 ntBASIC19.38■□□□□ 0.69
Lhx3P50481 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx3P50481 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx3P50481 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx3P50481 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx3P50481 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Lhx3P50481 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx3P50481 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx3P50481 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx3P50481 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx3P50481 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx3P50481 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx3P50481 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Lhx3P50481 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.36■□□□□ 0.69
Lhx3P50481 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx3P50481 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx3P50481 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx3P50481 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.36■□□□□ 0.69
Lhx3P50481 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx3P50481 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx3P50481 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx3P50481 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx3P50481 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Lhx3P50481 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx3P50481 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.35■□□□□ 0.69
Lhx3P50481 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.35■□□□□ 0.69
Lhx3P50481 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx3P50481 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx3P50481 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx3P50481 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx3P50481 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Lhx3P50481 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx3P50481 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx3P50481 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx3P50481 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx3P50481 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx3P50481 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.34■□□□□ 0.69
Lhx3P50481 Gm6420-201ENSMUST00000193885 723 ntBASIC19.34■□□□□ 0.69
Lhx3P50481 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Lhx3P50481 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx3P50481 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Lhx3P50481 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx3P50481 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Lhx3P50481 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx3P50481 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx3P50481 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx3P50481 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx3P50481 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.34■□□□□ 0.69
Lhx3P50481 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lhx3P50481 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lhx3P50481 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lhx3P50481 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.33■□□□□ 0.68
Lhx3P50481 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.33■□□□□ 0.68
Lhx3P50481 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.33■□□□□ 0.68
Lhx3P50481 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lhx3P50481 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lhx3P50481 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lhx3P50481 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lhx3P50481 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Lhx3P50481 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.32■□□□□ 0.68
Lhx3P50481 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx3P50481 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx3P50481 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx3P50481 Nespas-201ENSMUST00000143738 1083 ntBASIC19.32■□□□□ 0.68
Lhx3P50481 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx3P50481 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx3P50481 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.32■□□□□ 0.68
Lhx3P50481 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx3P50481 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.32■□□□□ 0.68
Lhx3P50481 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx3P50481 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx3P50481 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx3P50481 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx3P50481 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx3P50481 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx3P50481 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx3P50481 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.31■□□□□ 0.68
Lhx3P50481 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx3P50481 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx3P50481 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx3P50481 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.31■□□□□ 0.68
Lhx3P50481 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.31■□□□□ 0.68
Lhx3P50481 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.31■□□□□ 0.68
Lhx3P50481 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx3P50481 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx3P50481 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx3P50481 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms