Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rph3aP47708 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rph3aP47708 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rph3aP47708 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Rph3aP47708 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rph3aP47708 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rph3aP47708 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rph3aP47708 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.28■□□□□ 0.52
Rph3aP47708 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rph3aP47708 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rph3aP47708 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rph3aP47708 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rph3aP47708 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rph3aP47708 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.27■□□□□ 0.52
Rph3aP47708 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rph3aP47708 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rph3aP47708 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rph3aP47708 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rph3aP47708 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rph3aP47708 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rph3aP47708 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rph3aP47708 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rph3aP47708 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rph3aP47708 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rph3aP47708 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.26■□□□□ 0.51
Rph3aP47708 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rph3aP47708 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rph3aP47708 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.26■□□□□ 0.51
Rph3aP47708 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Rph3aP47708 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rph3aP47708 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rph3aP47708 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rph3aP47708 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rph3aP47708 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rph3aP47708 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rph3aP47708 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rph3aP47708 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
Rph3aP47708 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rph3aP47708 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rph3aP47708 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rph3aP47708 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rph3aP47708 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rph3aP47708 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.25■□□□□ 0.51
Rph3aP47708 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rph3aP47708 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rph3aP47708 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rph3aP47708 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rph3aP47708 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rph3aP47708 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rph3aP47708 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rph3aP47708 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rph3aP47708 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rph3aP47708 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rph3aP47708 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rph3aP47708 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.24■□□□□ 0.51
Rph3aP47708 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Rph3aP47708 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Rph3aP47708 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rph3aP47708 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rph3aP47708 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rph3aP47708 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rph3aP47708 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rph3aP47708 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.23■□□□□ 0.51
Rph3aP47708 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rph3aP47708 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rph3aP47708 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rph3aP47708 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rph3aP47708 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rph3aP47708 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rph3aP47708 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rph3aP47708 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rph3aP47708 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rph3aP47708 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rph3aP47708 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rph3aP47708 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rph3aP47708 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rph3aP47708 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rph3aP47708 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rph3aP47708 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rph3aP47708 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rph3aP47708 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rph3aP47708 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rph3aP47708 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rph3aP47708 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.22■□□□□ 0.51
Rph3aP47708 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.22■□□□□ 0.51
Rph3aP47708 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rph3aP47708 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rph3aP47708 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rph3aP47708 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rph3aP47708 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rph3aP47708 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rph3aP47708 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Rph3aP47708 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rph3aP47708 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rph3aP47708 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.21■□□□□ 0.51
Rph3aP47708 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.21■□□□□ 0.51
Rph3aP47708 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rph3aP47708 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rph3aP47708 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rph3aP47708 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms