Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.04■□□□□ 0.48
Slc6a11P31650 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a11P31650 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a11P31650 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Slc6a11P31650 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a11P31650 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.03■□□□□ 0.48
Slc6a11P31650 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Slc6a11P31650 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a11P31650 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a11P31650 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a11P31650 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a11P31650 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a11P31650 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a11P31650 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Slc6a11P31650 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a11P31650 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a11P31650 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a11P31650 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Slc6a11P31650 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a11P31650 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a11P31650 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a11P31650 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc6a11P31650 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc6a11P31650 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a11P31650 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a11P31650 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a11P31650 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a11P31650 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Slc6a11P31650 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a11P31650 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.01■□□□□ 0.47
Slc6a11P31650 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.01■□□□□ 0.47
Slc6a11P31650 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a11P31650 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Slc6a11P31650 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Slc6a11P31650 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a11P31650 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Slc6a11P31650 Gm7291-201ENSMUST00000199147 382 ntBASIC18.01■□□□□ 0.47
Slc6a11P31650 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a11P31650 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a11P31650 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a11P31650 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a11P31650 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a11P31650 BC021767-201ENSMUST00000126387 1716 ntBASIC18.01■□□□□ 0.47
Slc6a11P31650 Gm38342-201ENSMUST00000195710 2980 ntBASIC18■□□□□ 0.47
Slc6a11P31650 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a11P31650 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a11P31650 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc6a11P31650 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a11P31650 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a11P31650 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Slc6a11P31650 Gm43759-201ENSMUST00000196925 1261 ntBASIC18■□□□□ 0.47
Slc6a11P31650 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a11P31650 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Slc6a11P31650 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a11P31650 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Slc6a11P31650 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a11P31650 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a11P31650 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a11P31650 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a11P31650 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a11P31650 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a11P31650 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.99■□□□□ 0.47
Slc6a11P31650 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Slc6a11P31650 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a11P31650 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a11P31650 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a11P31650 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a11P31650 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a11P31650 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a11P31650 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a11P31650 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.98■□□□□ 0.47
Slc6a11P31650 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a11P31650 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a11P31650 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a11P31650 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a11P31650 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.98■□□□□ 0.47
Slc6a11P31650 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.98■□□□□ 0.47
Slc6a11P31650 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a11P31650 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a11P31650 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Slc6a11P31650 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a11P31650 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a11P31650 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a11P31650 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a11P31650 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.98■□□□□ 0.47
Slc6a11P31650 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a11P31650 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a11P31650 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a11P31650 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Slc6a11P31650 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.97■□□□□ 0.47
Slc6a11P31650 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.97■□□□□ 0.47
Slc6a11P31650 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a11P31650 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a11P31650 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a11P31650 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a11P31650 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.97■□□□□ 0.47
Slc6a11P31650 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Slc6a11P31650 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a11P31650 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a11P31650 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms