Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a1P31648 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a1P31648 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a1P31648 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.35■□□□□ 0.21
Slc6a1P31648 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.35■□□□□ 0.21
Slc6a1P31648 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Slc6a1P31648 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a1P31648 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Slc6a1P31648 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a1P31648 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a1P31648 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a1P31648 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a1P31648 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a1P31648 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a1P31648 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.35■□□□□ 0.21
Slc6a1P31648 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.35■□□□□ 0.21
Slc6a1P31648 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a1P31648 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Slc6a1P31648 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a1P31648 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a1P31648 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a1P31648 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.34■□□□□ 0.21
Slc6a1P31648 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a1P31648 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a1P31648 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a1P31648 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a1P31648 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.34■□□□□ 0.21
Slc6a1P31648 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.34■□□□□ 0.21
Slc6a1P31648 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Slc6a1P31648 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a1P31648 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a1P31648 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a1P31648 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a1P31648 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.34■□□□□ 0.21
Slc6a1P31648 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.34■□□□□ 0.21
Slc6a1P31648 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a1P31648 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc6a1P31648 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc6a1P31648 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a1P31648 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a1P31648 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.33■□□□□ 0.2
Slc6a1P31648 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a1P31648 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a1P31648 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a1P31648 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a1P31648 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.33■□□□□ 0.2
Slc6a1P31648 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Slc6a1P31648 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Slc6a1P31648 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a1P31648 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a1P31648 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a1P31648 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a1P31648 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Slc6a1P31648 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Slc6a1P31648 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Slc6a1P31648 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a1P31648 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.32■□□□□ 0.2
Slc6a1P31648 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a1P31648 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.32■□□□□ 0.2
Slc6a1P31648 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.32■□□□□ 0.2
Slc6a1P31648 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a1P31648 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a1P31648 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Slc6a1P31648 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Slc6a1P31648 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a1P31648 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Slc6a1P31648 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a1P31648 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a1P31648 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.31■□□□□ 0.2
Slc6a1P31648 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a1P31648 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a1P31648 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Slc6a1P31648 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a1P31648 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a1P31648 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Slc6a1P31648 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Slc6a1P31648 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a1P31648 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a1P31648 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a1P31648 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a1P31648 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a1P31648 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a1P31648 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a1P31648 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.3■□□□□ 0.2
Slc6a1P31648 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a1P31648 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Slc6a1P31648 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a1P31648 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.3■□□□□ 0.2
Slc6a1P31648 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Slc6a1P31648 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.3■□□□□ 0.2
Slc6a1P31648 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a1P31648 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a1P31648 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a1P31648 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a1P31648 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a1P31648 Fst-202ENSMUST00000223640 2612 ntBASIC16.3■□□□□ 0.2
Slc6a1P31648 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a1P31648 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a1P31648 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a1P31648 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms