Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.13■□□□□ 0.65
Gja4P28235 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gja4P28235 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Gja4P28235 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Gja4P28235 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gja4P28235 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.13■□□□□ 0.65
Gja4P28235 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gja4P28235 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gja4P28235 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Gja4P28235 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gja4P28235 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Gja4P28235 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.12■□□□□ 0.65
Gja4P28235 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gja4P28235 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.12■□□□□ 0.65
Gja4P28235 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gja4P28235 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gja4P28235 Gm10812-201ENSMUST00000099864 546 ntBASIC19.12■□□□□ 0.65
Gja4P28235 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gja4P28235 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Gja4P28235 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.11■□□□□ 0.65
Gja4P28235 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gja4P28235 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gja4P28235 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gja4P28235 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gja4P28235 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gja4P28235 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gja4P28235 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gja4P28235 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gja4P28235 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.1■□□□□ 0.65
Gja4P28235 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gja4P28235 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gja4P28235 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gja4P28235 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Gja4P28235 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gja4P28235 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gja4P28235 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Gja4P28235 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gja4P28235 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gja4P28235 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gja4P28235 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Gja4P28235 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gja4P28235 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gja4P28235 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Gja4P28235 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.1■□□□□ 0.65
Gja4P28235 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Gja4P28235 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gja4P28235 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gja4P28235 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gja4P28235 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gja4P28235 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gja4P28235 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Gja4P28235 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gja4P28235 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gja4P28235 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Gja4P28235 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gja4P28235 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Gja4P28235 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gja4P28235 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Gja4P28235 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.64
Gja4P28235 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Gja4P28235 Gm27275-201ENSMUST00000184318 272 ntBASIC19.08■□□□□ 0.64
Gja4P28235 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gja4P28235 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gja4P28235 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Gja4P28235 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Gja4P28235 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.08■□□□□ 0.64
Gja4P28235 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gja4P28235 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gja4P28235 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Gja4P28235 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Gja4P28235 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Gja4P28235 Gm12896-201ENSMUST00000118430 226 ntBASIC19.07■□□□□ 0.64
Gja4P28235 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.07■□□□□ 0.64
Gja4P28235 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gja4P28235 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Gja4P28235 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Gja4P28235 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gja4P28235 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Gja4P28235 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gja4P28235 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gja4P28235 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gja4P28235 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.06■□□□□ 0.64
Gja4P28235 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gja4P28235 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Gja4P28235 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gja4P28235 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Gja4P28235 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gja4P28235 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Gja4P28235 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.05■□□□□ 0.64
Gja4P28235 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gja4P28235 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gja4P28235 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gja4P28235 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Gja4P28235 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.05■□□□□ 0.64
Gja4P28235 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Gja4P28235 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gja4P28235 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.05■□□□□ 0.64
Gja4P28235 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.05■□□□□ 0.64
Gja4P28235 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.05■□□□□ 0.64
Gja4P28235 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms