Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pde6bP23440 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.71■□□□□ 0.91
Pde6bP23440 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pde6bP23440 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.71■□□□□ 0.91
Pde6bP23440 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Pde6bP23440 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Pde6bP23440 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Pde6bP23440 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pde6bP23440 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6bP23440 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6bP23440 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pde6bP23440 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6bP23440 Gm10653-202ENSMUST00000139570 835 ntBASIC20.7■□□□□ 0.9
Pde6bP23440 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.7■□□□□ 0.9
Pde6bP23440 Gm5408-201ENSMUST00000197998 747 ntBASIC20.7■□□□□ 0.9
Pde6bP23440 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.7■□□□□ 0.9
Pde6bP23440 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Pde6bP23440 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6bP23440 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6bP23440 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6bP23440 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pde6bP23440 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pde6bP23440 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pde6bP23440 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pde6bP23440 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pde6bP23440 Gm13148-201ENSMUST00000118892 745 ntBASIC20.69■□□□□ 0.9
Pde6bP23440 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pde6bP23440 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pde6bP23440 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pde6bP23440 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pde6bP23440 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pde6bP23440 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pde6bP23440 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pde6bP23440 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pde6bP23440 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.68■□□□□ 0.9
Pde6bP23440 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pde6bP23440 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pde6bP23440 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.68■□□□□ 0.9
Pde6bP23440 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pde6bP23440 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pde6bP23440 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pde6bP23440 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pde6bP23440 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pde6bP23440 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.67■□□□□ 0.9
Pde6bP23440 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pde6bP23440 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.67■□□□□ 0.9
Pde6bP23440 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pde6bP23440 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pde6bP23440 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pde6bP23440 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Pde6bP23440 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pde6bP23440 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pde6bP23440 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pde6bP23440 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6bP23440 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6bP23440 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6bP23440 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6bP23440 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6bP23440 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6bP23440 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.66■□□□□ 0.9
Pde6bP23440 Gm20760-201ENSMUST00000179197 648 ntBASIC20.66■□□□□ 0.9
Pde6bP23440 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pde6bP23440 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6bP23440 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6bP23440 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6bP23440 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6bP23440 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6bP23440 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6bP23440 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.66■□□□□ 0.9
Pde6bP23440 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6bP23440 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6bP23440 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pde6bP23440 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6bP23440 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6bP23440 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6bP23440 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6bP23440 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6bP23440 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6bP23440 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6bP23440 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6bP23440 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.65■□□□□ 0.9
Pde6bP23440 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6bP23440 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Pde6bP23440 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pde6bP23440 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pde6bP23440 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pde6bP23440 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.64■□□□□ 0.89
Pde6bP23440 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.64■□□□□ 0.89
Pde6bP23440 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pde6bP23440 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pde6bP23440 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pde6bP23440 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6bP23440 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Pde6bP23440 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Pde6bP23440 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6bP23440 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6bP23440 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6bP23440 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pde6bP23440 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6bP23440 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms