Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmga1P17095 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.59■□□□□ 0.73
Hmga1P17095 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Hmga1P17095 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Hmga1P17095 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmga1P17095 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmga1P17095 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hmga1P17095 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmga1P17095 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmga1P17095 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmga1P17095 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmga1P17095 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmga1P17095 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmga1P17095 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Hmga1P17095 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmga1P17095 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmga1P17095 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmga1P17095 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmga1P17095 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hmga1P17095 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.58■□□□□ 0.73
Hmga1P17095 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hmga1P17095 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hmga1P17095 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Hmga1P17095 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Hmga1P17095 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmga1P17095 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmga1P17095 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmga1P17095 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hmga1P17095 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmga1P17095 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmga1P17095 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmga1P17095 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Hmga1P17095 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmga1P17095 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmga1P17095 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmga1P17095 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmga1P17095 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hmga1P17095 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmga1P17095 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmga1P17095 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmga1P17095 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Hmga1P17095 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Hmga1P17095 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmga1P17095 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmga1P17095 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmga1P17095 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Hmga1P17095 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmga1P17095 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hmga1P17095 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.56■□□□□ 0.72
Hmga1P17095 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmga1P17095 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmga1P17095 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmga1P17095 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmga1P17095 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmga1P17095 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmga1P17095 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmga1P17095 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmga1P17095 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmga1P17095 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Hmga1P17095 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmga1P17095 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Hmga1P17095 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hmga1P17095 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.55■□□□□ 0.72
Hmga1P17095 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Hmga1P17095 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmga1P17095 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hmga1P17095 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Hmga1P17095 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
Hmga1P17095 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Hmga1P17095 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Hmga1P17095 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hmga1P17095 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
Hmga1P17095 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hmga1P17095 Gm5408-201ENSMUST00000197998 747 ntBASIC19.54■□□□□ 0.72
Hmga1P17095 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hmga1P17095 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hmga1P17095 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.54■□□□□ 0.72
Hmga1P17095 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmga1P17095 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmga1P17095 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hmga1P17095 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmga1P17095 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmga1P17095 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Hmga1P17095 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hmga1P17095 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hmga1P17095 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmga1P17095 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmga1P17095 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmga1P17095 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Hmga1P17095 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmga1P17095 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.53■□□□□ 0.72
Hmga1P17095 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmga1P17095 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.53■□□□□ 0.72
Hmga1P17095 Gm12527-201ENSMUST00000117967 564 ntBASIC19.53■□□□□ 0.72
Hmga1P17095 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Hmga1P17095 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.53■□□□□ 0.72
Hmga1P17095 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmga1P17095 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.53■□□□□ 0.72
Hmga1P17095 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmga1P17095 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms