Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hoxc6P10629 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.26■□□□□ 0.99
Hoxc6P10629 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Hoxc6P10629 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.25■□□□□ 0.99
Hoxc6P10629 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.25■□□□□ 0.99
Hoxc6P10629 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.25■□□□□ 0.99
Hoxc6P10629 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Hoxc6P10629 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.25■□□□□ 0.99
Hoxc6P10629 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hoxc6P10629 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hoxc6P10629 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.25■□□□□ 0.99
Hoxc6P10629 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Hoxc6P10629 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc6P10629 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc6P10629 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Hoxc6P10629 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc6P10629 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.24■□□□□ 0.99
Hoxc6P10629 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc6P10629 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc6P10629 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc6P10629 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Hoxc6P10629 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc6P10629 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc6P10629 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc6P10629 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.23■□□□□ 0.99
Hoxc6P10629 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc6P10629 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc6P10629 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.23■□□□□ 0.99
Hoxc6P10629 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc6P10629 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc6P10629 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc6P10629 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc6P10629 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Hoxc6P10629 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc6P10629 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc6P10629 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Hoxc6P10629 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc6P10629 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc6P10629 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc6P10629 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc6P10629 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Hoxc6P10629 Gm6576-201ENSMUST00000169678 883 ntBASIC21.22■□□□□ 0.99
Hoxc6P10629 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Hoxc6P10629 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc6P10629 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc6P10629 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc6P10629 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc6P10629 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc6P10629 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.21■□□□□ 0.99
Hoxc6P10629 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.21■□□□□ 0.99
Hoxc6P10629 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Hoxc6P10629 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc6P10629 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc6P10629 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc6P10629 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc6P10629 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc6P10629 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.2■□□□□ 0.98
Hoxc6P10629 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc6P10629 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc6P10629 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.2■□□□□ 0.98
Hoxc6P10629 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc6P10629 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc6P10629 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.2■□□□□ 0.98
Hoxc6P10629 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc6P10629 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc6P10629 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc6P10629 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc6P10629 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Hoxc6P10629 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc6P10629 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc6P10629 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc6P10629 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc6P10629 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc6P10629 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc6P10629 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.19■□□□□ 0.98
Hoxc6P10629 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc6P10629 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.19■□□□□ 0.98
Hoxc6P10629 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc6P10629 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc6P10629 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc6P10629 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc6P10629 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc6P10629 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc6P10629 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Hoxc6P10629 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.18■□□□□ 0.98
Hoxc6P10629 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.18■□□□□ 0.98
Hoxc6P10629 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.18■□□□□ 0.98
Hoxc6P10629 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc6P10629 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc6P10629 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Hoxc6P10629 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc6P10629 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc6P10629 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc6P10629 Gm44549-201ENSMUST00000208351 577 ntBASIC21.17■□□□□ 0.98
Hoxc6P10629 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.17■□□□□ 0.98
Hoxc6P10629 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc6P10629 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc6P10629 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc6P10629 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc6P10629 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms