Protein–RNA interactions for Protein: P06728

Apoa4, Apolipoprotein A-IV, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa4P06728 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Apoa4P06728 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Apoa4P06728 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Apoa4P06728 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Apoa4P06728 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Apoa4P06728 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.69■□□□□ 0.58
Apoa4P06728 Serp2-204ENSMUST00000228055 705 ntBASIC18.69■□□□□ 0.58
Apoa4P06728 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Apoa4P06728 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Apoa4P06728 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Apoa4P06728 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Apoa4P06728 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Apoa4P06728 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Apoa4P06728 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Apoa4P06728 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Apoa4P06728 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Apoa4P06728 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Apoa4P06728 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Apoa4P06728 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.68■□□□□ 0.58
Apoa4P06728 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Apoa4P06728 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Apoa4P06728 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Apoa4P06728 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Apoa4P06728 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Apoa4P06728 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Apoa4P06728 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Apoa4P06728 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Apoa4P06728 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Apoa4P06728 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Apoa4P06728 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.68■□□□□ 0.58
Apoa4P06728 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Apoa4P06728 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Apoa4P06728 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Apoa4P06728 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Apoa4P06728 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Apoa4P06728 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Apoa4P06728 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Apoa4P06728 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Apoa4P06728 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Apoa4P06728 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Apoa4P06728 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.67■□□□□ 0.58
Apoa4P06728 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.67■□□□□ 0.58
Apoa4P06728 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Apoa4P06728 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Apoa4P06728 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Apoa4P06728 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Apoa4P06728 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Apoa4P06728 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.66■□□□□ 0.58
Apoa4P06728 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Apoa4P06728 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Apoa4P06728 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.66■□□□□ 0.58
Apoa4P06728 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Apoa4P06728 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Apoa4P06728 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Apoa4P06728 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Apoa4P06728 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Apoa4P06728 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Apoa4P06728 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Apoa4P06728 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Apoa4P06728 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Apoa4P06728 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Apoa4P06728 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Apoa4P06728 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Apoa4P06728 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.65■□□□□ 0.58
Apoa4P06728 Gm43137-201ENSMUST00000198052 594 ntBASIC18.65■□□□□ 0.58
Apoa4P06728 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Apoa4P06728 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Apoa4P06728 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Apoa4P06728 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.65■□□□□ 0.58
Apoa4P06728 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Apoa4P06728 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Apoa4P06728 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Apoa4P06728 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Apoa4P06728 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Apoa4P06728 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Apoa4P06728 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Apoa4P06728 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Apoa4P06728 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Apoa4P06728 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Apoa4P06728 Spcs1-204ENSMUST00000226782 949 ntBASIC18.64■□□□□ 0.57
Apoa4P06728 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Apoa4P06728 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.64■□□□□ 0.57
Apoa4P06728 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Apoa4P06728 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Apoa4P06728 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Apoa4P06728 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Apoa4P06728 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Apoa4P06728 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Apoa4P06728 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Apoa4P06728 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Apoa4P06728 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Apoa4P06728 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Apoa4P06728 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Apoa4P06728 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.63■□□□□ 0.57
Apoa4P06728 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.63■□□□□ 0.57
Apoa4P06728 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.63■□□□□ 0.57
Apoa4P06728 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.63■□□□□ 0.57
Apoa4P06728 Gm21956-201ENSMUST00000179946 522 ntBASIC18.63■□□□□ 0.57
Apoa4P06728 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Apoa4P06728 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms