Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.97■□□□□ 0.31
P06344 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P06344 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
P06344 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
P06344 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
P06344 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
P06344 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.97■□□□□ 0.31
P06344 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.97■□□□□ 0.31
P06344 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P06344 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
P06344 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P06344 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P06344 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
P06344 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
P06344 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
P06344 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P06344 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P06344 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
P06344 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
P06344 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.96■□□□□ 0.3
P06344 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
P06344 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
P06344 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P06344 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
P06344 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P06344 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P06344 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P06344 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
P06344 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.95■□□□□ 0.3
P06344 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.95■□□□□ 0.3
P06344 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P06344 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.95■□□□□ 0.3
P06344 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P06344 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
P06344 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.95■□□□□ 0.3
P06344 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
P06344 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P06344 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
P06344 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
P06344 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
P06344 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
P06344 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
P06344 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.94■□□□□ 0.3
P06344 Gm37179-201ENSMUST00000194862 823 ntBASIC16.94■□□□□ 0.3
P06344 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.94■□□□□ 0.3
P06344 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.94■□□□□ 0.3
P06344 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.94■□□□□ 0.3
P06344 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
P06344 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
P06344 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
P06344 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P06344 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
P06344 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P06344 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
P06344 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
P06344 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
P06344 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
P06344 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P06344 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
P06344 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
P06344 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.93■□□□□ 0.3
P06344 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
P06344 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
P06344 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P06344 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P06344 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
P06344 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P06344 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.92■□□□□ 0.3
P06344 Gm13146-201ENSMUST00000118508 780 ntBASIC16.92■□□□□ 0.3
P06344 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
P06344 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
P06344 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.92■□□□□ 0.3
P06344 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.92■□□□□ 0.3
P06344 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P06344 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
P06344 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.92■□□□□ 0.3
P06344 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
P06344 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.92■□□□□ 0.3
P06344 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P06344 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
P06344 Gm7860-201ENSMUST00000121190 879 ntBASIC16.91■□□□□ 0.3
P06344 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P06344 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
P06344 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.91■□□□□ 0.3
P06344 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P06344 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P06344 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
P06344 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.9■□□□□ 0.3
P06344 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06344 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
P06344 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.9■□□□□ 0.3
P06344 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06344 Gm7514-201ENSMUST00000209475 934 ntBASIC16.9■□□□□ 0.3
P06344 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
P06344 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06344 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06344 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06344 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06344 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06344 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms