Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC12.05□□□□□ -0.48
P06320 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
P06320 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC12.05□□□□□ -0.48
P06320 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC12.05□□□□□ -0.48
P06320 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Gm43231-201ENSMUST00000202960 2258 ntBASIC12.05□□□□□ -0.48
P06320 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.05□□□□□ -0.48
P06320 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
P06320 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
P06320 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06320 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06320 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06320 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P06320 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06320 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.04□□□□□ -0.48
P06320 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06320 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
P06320 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06320 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06320 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P06320 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
P06320 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06320 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
P06320 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC12.04□□□□□ -0.48
P06320 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
P06320 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06320 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06320 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
P06320 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
P06320 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P06320 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06320 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P06320 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06320 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P06320 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06320 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC12.04□□□□□ -0.48
P06320 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.03□□□□□ -0.48
P06320 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
P06320 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.03□□□□□ -0.48
P06320 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
P06320 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
P06320 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Gm5540-201ENSMUST00000131852 1848 ntBASIC12.03□□□□□ -0.48
P06320 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 AC126028.2-201ENSMUST00000228100 1833 ntBASIC12.03□□□□□ -0.48
P06320 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
P06320 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Gm10620-201ENSMUST00000098379 1332 ntBASIC12.03□□□□□ -0.48
P06320 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Cdkn3-203ENSMUST00000227149 1952 ntBASIC12.03□□□□□ -0.48
P06320 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
P06320 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06320 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
P06320 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06320 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06320 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P06320 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P06320 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06320 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06320 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06320 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
P06320 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P06320 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06320 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06320 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms