Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.86■□□□□ 0.77
PrnpP04925 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PrnpP04925 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PrnpP04925 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PrnpP04925 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PrnpP04925 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.85■□□□□ 0.77
PrnpP04925 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PrnpP04925 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.85■□□□□ 0.77
PrnpP04925 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PrnpP04925 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.85■□□□□ 0.77
PrnpP04925 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.85■□□□□ 0.77
PrnpP04925 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PrnpP04925 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.85■□□□□ 0.77
PrnpP04925 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PrnpP04925 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PrnpP04925 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.84■□□□□ 0.77
PrnpP04925 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.84■□□□□ 0.77
PrnpP04925 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PrnpP04925 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.84■□□□□ 0.77
PrnpP04925 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PrnpP04925 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PrnpP04925 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PrnpP04925 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.84■□□□□ 0.77
PrnpP04925 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PrnpP04925 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PrnpP04925 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PrnpP04925 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PrnpP04925 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PrnpP04925 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PrnpP04925 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PrnpP04925 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PrnpP04925 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PrnpP04925 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PrnpP04925 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.83■□□□□ 0.77
PrnpP04925 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PrnpP04925 Gm2559-201ENSMUST00000201323 363 ntBASIC19.83■□□□□ 0.77
PrnpP04925 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PrnpP04925 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
PrnpP04925 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PrnpP04925 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PrnpP04925 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PrnpP04925 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PrnpP04925 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
PrnpP04925 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
PrnpP04925 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.83■□□□□ 0.76
PrnpP04925 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PrnpP04925 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PrnpP04925 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PrnpP04925 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PrnpP04925 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PrnpP04925 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PrnpP04925 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PrnpP04925 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PrnpP04925 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PrnpP04925 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PrnpP04925 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PrnpP04925 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PrnpP04925 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PrnpP04925 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PrnpP04925 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PrnpP04925 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PrnpP04925 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PrnpP04925 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PrnpP04925 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.81■□□□□ 0.76
PrnpP04925 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.81■□□□□ 0.76
PrnpP04925 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PrnpP04925 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PrnpP04925 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PrnpP04925 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PrnpP04925 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PrnpP04925 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PrnpP04925 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PrnpP04925 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PrnpP04925 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PrnpP04925 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.8■□□□□ 0.76
PrnpP04925 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PrnpP04925 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PrnpP04925 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PrnpP04925 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PrnpP04925 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PrnpP04925 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PrnpP04925 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.79■□□□□ 0.76
PrnpP04925 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PrnpP04925 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PrnpP04925 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PrnpP04925 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PrnpP04925 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PrnpP04925 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PrnpP04925 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PrnpP04925 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
PrnpP04925 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PrnpP04925 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PrnpP04925 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.78■□□□□ 0.76
PrnpP04925 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.78■□□□□ 0.76
PrnpP04925 Mir7071-201ENSMUST00000184847 69 ntBASIC19.78■□□□□ 0.76
PrnpP04925 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.78■□□□□ 0.76
PrnpP04925 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PrnpP04925 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PrnpP04925 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PrnpP04925 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms