Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col4a1P02463 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col4a1P02463 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col4a1P02463 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col4a1P02463 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Col4a1P02463 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col4a1P02463 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Col4a1P02463 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col4a1P02463 Gm10812-201ENSMUST00000099864 546 ntBASIC23.76■■□□□ 1.39
Col4a1P02463 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col4a1P02463 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.75■■□□□ 1.39
Col4a1P02463 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC23.75■■□□□ 1.39
Col4a1P02463 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col4a1P02463 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Col4a1P02463 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col4a1P02463 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Col4a1P02463 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC23.75■■□□□ 1.39
Col4a1P02463 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC23.75■■□□□ 1.39
Col4a1P02463 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col4a1P02463 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.75■■□□□ 1.39
Col4a1P02463 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col4a1P02463 Gm10167-201ENSMUST00000150411 1479 ntBASIC23.75■■□□□ 1.39
Col4a1P02463 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col4a1P02463 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Col4a1P02463 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col4a1P02463 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col4a1P02463 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col4a1P02463 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Col4a1P02463 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC23.74■■□□□ 1.39
Col4a1P02463 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col4a1P02463 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Col4a1P02463 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Col4a1P02463 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col4a1P02463 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col4a1P02463 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col4a1P02463 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col4a1P02463 Dio3-201ENSMUST00000097228 1449 ntBASIC23.73■■□□□ 1.39
Col4a1P02463 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col4a1P02463 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC23.73■■□□□ 1.39
Col4a1P02463 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Col4a1P02463 Mir7071-201ENSMUST00000184847 69 ntBASIC23.73■■□□□ 1.39
Col4a1P02463 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col4a1P02463 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col4a1P02463 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Col4a1P02463 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.72■■□□□ 1.39
Col4a1P02463 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Col4a1P02463 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.72■■□□□ 1.39
Col4a1P02463 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col4a1P02463 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col4a1P02463 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC23.71■■□□□ 1.39
Col4a1P02463 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col4a1P02463 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col4a1P02463 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Col4a1P02463 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.71■■□□□ 1.39
Col4a1P02463 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col4a1P02463 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Col4a1P02463 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Col4a1P02463 Gm45640-201ENSMUST00000210665 1896 ntBASIC23.71■■□□□ 1.39
Col4a1P02463 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col4a1P02463 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC23.7■■□□□ 1.39
Col4a1P02463 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Col4a1P02463 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col4a1P02463 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Col4a1P02463 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Col4a1P02463 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col4a1P02463 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Col4a1P02463 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
Col4a1P02463 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col4a1P02463 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col4a1P02463 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC23.7■■□□□ 1.38
Col4a1P02463 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Col4a1P02463 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col4a1P02463 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col4a1P02463 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Col4a1P02463 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Col4a1P02463 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col4a1P02463 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC23.69■■□□□ 1.38
Col4a1P02463 Gm29241-201ENSMUST00000189260 1096 ntBASIC23.69■■□□□ 1.38
Col4a1P02463 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col4a1P02463 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC23.69■■□□□ 1.38
Col4a1P02463 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col4a1P02463 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col4a1P02463 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
Col4a1P02463 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col4a1P02463 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col4a1P02463 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col4a1P02463 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col4a1P02463 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col4a1P02463 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
Col4a1P02463 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Col4a1P02463 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col4a1P02463 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC23.68■■□□□ 1.38
Col4a1P02463 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col4a1P02463 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Col4a1P02463 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col4a1P02463 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC23.67■■□□□ 1.38
Col4a1P02463 Gm5643-201ENSMUST00000117081 966 ntBASIC23.67■■□□□ 1.38
Col4a1P02463 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Col4a1P02463 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC23.67■■□□□ 1.38
Col4a1P02463 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms