Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tp53P02340 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tp53P02340 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tp53P02340 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tp53P02340 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tp53P02340 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tp53P02340 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.63■□□□□ 0.89
Tp53P02340 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tp53P02340 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tp53P02340 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.63■□□□□ 0.89
Tp53P02340 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tp53P02340 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tp53P02340 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.62■□□□□ 0.89
Tp53P02340 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tp53P02340 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tp53P02340 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tp53P02340 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tp53P02340 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.62■□□□□ 0.89
Tp53P02340 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tp53P02340 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.62■□□□□ 0.89
Tp53P02340 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tp53P02340 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tp53P02340 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tp53P02340 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tp53P02340 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Tp53P02340 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tp53P02340 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tp53P02340 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tp53P02340 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Tp53P02340 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tp53P02340 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tp53P02340 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tp53P02340 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tp53P02340 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.61■□□□□ 0.89
Tp53P02340 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.61■□□□□ 0.89
Tp53P02340 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tp53P02340 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tp53P02340 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tp53P02340 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Tp53P02340 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tp53P02340 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Tp53P02340 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.61■□□□□ 0.89
Tp53P02340 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tp53P02340 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tp53P02340 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tp53P02340 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tp53P02340 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tp53P02340 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tp53P02340 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tp53P02340 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tp53P02340 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tp53P02340 Gm38205-201ENSMUST00000192243 258 ntBASIC20.6■□□□□ 0.89
Tp53P02340 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tp53P02340 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tp53P02340 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Tp53P02340 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tp53P02340 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tp53P02340 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tp53P02340 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Tp53P02340 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tp53P02340 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tp53P02340 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.59■□□□□ 0.89
Tp53P02340 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tp53P02340 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tp53P02340 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.59■□□□□ 0.89
Tp53P02340 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tp53P02340 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tp53P02340 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.59■□□□□ 0.89
Tp53P02340 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tp53P02340 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tp53P02340 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tp53P02340 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tp53P02340 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tp53P02340 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tp53P02340 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tp53P02340 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Tp53P02340 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Tp53P02340 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tp53P02340 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tp53P02340 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tp53P02340 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tp53P02340 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tp53P02340 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tp53P02340 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.58■□□□□ 0.88
Tp53P02340 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tp53P02340 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tp53P02340 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Tp53P02340 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tp53P02340 BC021767-201ENSMUST00000126387 1716 ntBASIC20.57■□□□□ 0.88
Tp53P02340 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.57■□□□□ 0.88
Tp53P02340 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tp53P02340 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Tp53P02340 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tp53P02340 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tp53P02340 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tp53P02340 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tp53P02340 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tp53P02340 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tp53P02340 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tp53P02340 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms