Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
P01739 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P01739 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P01739 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P01739 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
P01739 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.29□□□□□ -0.12
P01739 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P01739 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
P01739 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
P01739 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P01739 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P01739 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P01739 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.29□□□□□ -0.12
P01739 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P01739 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.29□□□□□ -0.12
P01739 Mir7075-201ENSMUST00000184187 82 ntBASIC14.29□□□□□ -0.12
P01739 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.29□□□□□ -0.12
P01739 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P01739 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
P01739 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.29□□□□□ -0.12
P01739 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
P01739 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P01739 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P01739 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P01739 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P01739 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P01739 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P01739 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P01739 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P01739 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.28□□□□□ -0.12
P01739 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P01739 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P01739 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.28□□□□□ -0.12
P01739 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P01739 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P01739 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P01739 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.28□□□□□ -0.12
P01739 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
P01739 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
P01739 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P01739 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
P01739 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P01739 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P01739 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P01739 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
P01739 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P01739 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P01739 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
P01739 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P01739 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
P01739 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P01739 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
P01739 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.27□□□□□ -0.12
P01739 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P01739 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P01739 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P01739 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P01739 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01739 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.27□□□□□ -0.13
P01739 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P01739 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
P01739 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
P01739 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
P01739 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01739 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01739 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.27□□□□□ -0.13
P01739 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01739 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01739 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P01739 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01739 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01739 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.27□□□□□ -0.13
P01739 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P01739 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01739 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
P01739 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01739 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01739 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01739 Golph3-205ENSMUST00000228671 2842 ntBASIC14.26□□□□□ -0.13
P01739 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01739 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01739 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
P01739 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
P01739 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01739 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
P01739 Gm12821-201ENSMUST00000120022 600 ntBASIC14.26□□□□□ -0.13
P01739 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P01739 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01739 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
P01739 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.26□□□□□ -0.13
P01739 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P01739 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
P01739 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P01739 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01739 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01739 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P01739 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P01739 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01739 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01739 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms