Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.4■□□□□ 0.54
Best1O88870 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Best1O88870 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Best1O88870 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Best1O88870 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Best1O88870 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Best1O88870 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Best1O88870 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Best1O88870 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Best1O88870 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Best1O88870 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Best1O88870 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Best1O88870 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Best1O88870 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.39■□□□□ 0.53
Best1O88870 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Best1O88870 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.38■□□□□ 0.53
Best1O88870 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Best1O88870 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Best1O88870 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Best1O88870 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Best1O88870 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Best1O88870 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Best1O88870 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Best1O88870 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Best1O88870 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Best1O88870 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Best1O88870 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Best1O88870 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Best1O88870 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Best1O88870 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.37■□□□□ 0.53
Best1O88870 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Best1O88870 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Best1O88870 Gm13148-201ENSMUST00000118892 745 ntBASIC18.37■□□□□ 0.53
Best1O88870 Gm6211-202ENSMUST00000167849 925 ntBASIC18.37■□□□□ 0.53
Best1O88870 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Best1O88870 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Best1O88870 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Best1O88870 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Best1O88870 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Best1O88870 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Best1O88870 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Best1O88870 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Best1O88870 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Best1O88870 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Best1O88870 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Best1O88870 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
Best1O88870 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Best1O88870 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.36■□□□□ 0.53
Best1O88870 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.36■□□□□ 0.53
Best1O88870 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Best1O88870 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.36■□□□□ 0.53
Best1O88870 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.36■□□□□ 0.53
Best1O88870 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Best1O88870 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Best1O88870 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Best1O88870 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Best1O88870 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Best1O88870 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Best1O88870 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Best1O88870 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Best1O88870 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Best1O88870 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Best1O88870 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Best1O88870 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.35■□□□□ 0.53
Best1O88870 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.35■□□□□ 0.53
Best1O88870 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.35■□□□□ 0.53
Best1O88870 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Best1O88870 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
Best1O88870 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Best1O88870 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Best1O88870 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Best1O88870 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Best1O88870 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Best1O88870 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Best1O88870 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Best1O88870 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Best1O88870 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Best1O88870 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Best1O88870 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Best1O88870 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Best1O88870 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Best1O88870 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Best1O88870 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Best1O88870 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Best1O88870 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Best1O88870 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Best1O88870 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.33■□□□□ 0.52
Best1O88870 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.33■□□□□ 0.52
Best1O88870 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Best1O88870 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Best1O88870 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Best1O88870 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Best1O88870 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Best1O88870 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.32■□□□□ 0.52
Best1O88870 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Best1O88870 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Best1O88870 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Best1O88870 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.32■□□□□ 0.52
Best1O88870 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.32■□□□□ 0.52
Best1O88870 Gm4968-201ENSMUST00000071458 858 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms