Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ShdO88834 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ShdO88834 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ShdO88834 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ShdO88834 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ShdO88834 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ShdO88834 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ShdO88834 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ShdO88834 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ShdO88834 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ShdO88834 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ShdO88834 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ShdO88834 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.46■□□□□ 0.71
ShdO88834 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.46■□□□□ 0.71
ShdO88834 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.46■□□□□ 0.71
ShdO88834 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ShdO88834 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ShdO88834 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ShdO88834 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ShdO88834 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ShdO88834 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ShdO88834 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.45■□□□□ 0.7
ShdO88834 Gm7860-201ENSMUST00000121190 879 ntBASIC19.45■□□□□ 0.7
ShdO88834 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.45■□□□□ 0.7
ShdO88834 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ShdO88834 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ShdO88834 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ShdO88834 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ShdO88834 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.45■□□□□ 0.7
ShdO88834 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ShdO88834 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ShdO88834 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.44■□□□□ 0.7
ShdO88834 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ShdO88834 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShdO88834 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.44■□□□□ 0.7
ShdO88834 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ShdO88834 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.44■□□□□ 0.7
ShdO88834 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShdO88834 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ShdO88834 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShdO88834 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShdO88834 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShdO88834 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShdO88834 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShdO88834 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShdO88834 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ShdO88834 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ShdO88834 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ShdO88834 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ShdO88834 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.43■□□□□ 0.7
ShdO88834 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.43■□□□□ 0.7
ShdO88834 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
ShdO88834 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ShdO88834 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ShdO88834 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ShdO88834 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ShdO88834 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ShdO88834 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ShdO88834 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ShdO88834 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.42■□□□□ 0.7
ShdO88834 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
ShdO88834 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShdO88834 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShdO88834 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.42■□□□□ 0.7
ShdO88834 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.42■□□□□ 0.7
ShdO88834 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShdO88834 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShdO88834 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ShdO88834 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.42■□□□□ 0.7
ShdO88834 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ShdO88834 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.42■□□□□ 0.7
ShdO88834 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ShdO88834 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShdO88834 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShdO88834 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShdO88834 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ShdO88834 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShdO88834 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShdO88834 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShdO88834 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShdO88834 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShdO88834 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShdO88834 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShdO88834 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ShdO88834 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShdO88834 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShdO88834 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ShdO88834 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShdO88834 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ShdO88834 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShdO88834 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShdO88834 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShdO88834 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShdO88834 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.41■□□□□ 0.7
ShdO88834 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShdO88834 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShdO88834 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShdO88834 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShdO88834 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShdO88834 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms