Protein–RNA interactions for Protein: O88809

Dcx, Neuronal migration protein doublecortin, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DcxO88809 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
DcxO88809 Gm18666-201ENSMUST00000190039 958 ntBASIC20.74■□□□□ 0.91
DcxO88809 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DcxO88809 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DcxO88809 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.74■□□□□ 0.91
DcxO88809 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
DcxO88809 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DcxO88809 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DcxO88809 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DcxO88809 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DcxO88809 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DcxO88809 Mir1199-201ENSMUST00000117015 119 ntBASIC20.73■□□□□ 0.91
DcxO88809 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.73■□□□□ 0.91
DcxO88809 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.73■□□□□ 0.91
DcxO88809 Gm10698-201ENSMUST00000182663 604 ntBASIC20.73■□□□□ 0.91
DcxO88809 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DcxO88809 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DcxO88809 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DcxO88809 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DcxO88809 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
DcxO88809 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DcxO88809 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DcxO88809 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DcxO88809 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DcxO88809 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
DcxO88809 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DcxO88809 Gm10231-201ENSMUST00000181584 441 ntBASIC20.72■□□□□ 0.91
DcxO88809 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DcxO88809 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.72■□□□□ 0.91
DcxO88809 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.72■□□□□ 0.91
DcxO88809 Gm10175-202ENSMUST00000208752 441 ntBASIC20.72■□□□□ 0.91
DcxO88809 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DcxO88809 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DcxO88809 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.72■□□□□ 0.91
DcxO88809 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DcxO88809 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DcxO88809 Dio3-201ENSMUST00000097228 1449 ntBASIC20.71■□□□□ 0.91
DcxO88809 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DcxO88809 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DcxO88809 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DcxO88809 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DcxO88809 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DcxO88809 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DcxO88809 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DcxO88809 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DcxO88809 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DcxO88809 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.71■□□□□ 0.91
DcxO88809 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DcxO88809 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
DcxO88809 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DcxO88809 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.7■□□□□ 0.9
DcxO88809 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
DcxO88809 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DcxO88809 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DcxO88809 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DcxO88809 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DcxO88809 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DcxO88809 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DcxO88809 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DcxO88809 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DcxO88809 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
DcxO88809 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
DcxO88809 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.69■□□□□ 0.9
DcxO88809 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DcxO88809 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
DcxO88809 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DcxO88809 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DcxO88809 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.68■□□□□ 0.9
DcxO88809 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DcxO88809 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DcxO88809 Gm11249-201ENSMUST00000117071 859 ntBASIC20.68■□□□□ 0.9
DcxO88809 Gm6433-201ENSMUST00000118634 875 ntBASIC20.68■□□□□ 0.9
DcxO88809 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.68■□□□□ 0.9
DcxO88809 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.68■□□□□ 0.9
DcxO88809 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
DcxO88809 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.68■□□□□ 0.9
DcxO88809 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
DcxO88809 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DcxO88809 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DcxO88809 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
DcxO88809 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.67■□□□□ 0.9
DcxO88809 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DcxO88809 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
DcxO88809 Gm15378-201ENSMUST00000121894 207 ntBASIC20.67■□□□□ 0.9
DcxO88809 Gm43799-201ENSMUST00000201845 579 ntBASIC20.67■□□□□ 0.9
DcxO88809 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DcxO88809 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DcxO88809 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DcxO88809 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
DcxO88809 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.67■□□□□ 0.9
DcxO88809 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
DcxO88809 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
DcxO88809 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DcxO88809 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DcxO88809 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.66■□□□□ 0.9
DcxO88809 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.66■□□□□ 0.9
DcxO88809 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.66■□□□□ 0.9
DcxO88809 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
DcxO88809 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DcxO88809 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms