Protein–RNA interactions for Protein: O88665

Brd7, Bromodomain-containing protein 7, mousemouse

Known RBP Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd7O88665 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.83■□□□□ 0.28
Brd7O88665 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.83■□□□□ 0.28
Brd7O88665 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brd7O88665 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brd7O88665 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brd7O88665 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brd7O88665 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brd7O88665 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Brd7O88665 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brd7O88665 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.83■□□□□ 0.28
Brd7O88665 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.82■□□□□ 0.28
Brd7O88665 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brd7O88665 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brd7O88665 AA386476-201ENSMUST00000098781 1665 ntBASIC16.82■□□□□ 0.28
Brd7O88665 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brd7O88665 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.82■□□□□ 0.28
Brd7O88665 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brd7O88665 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.82■□□□□ 0.28
Brd7O88665 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brd7O88665 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Brd7O88665 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brd7O88665 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Brd7O88665 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brd7O88665 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brd7O88665 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brd7O88665 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brd7O88665 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Brd7O88665 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brd7O88665 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brd7O88665 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brd7O88665 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brd7O88665 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brd7O88665 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brd7O88665 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Brd7O88665 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brd7O88665 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Brd7O88665 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brd7O88665 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brd7O88665 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brd7O88665 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Brd7O88665 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.8■□□□□ 0.28
Brd7O88665 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.8■□□□□ 0.28
Brd7O88665 Gm43530-201ENSMUST00000195920 274 ntBASIC16.8■□□□□ 0.28
Brd7O88665 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Brd7O88665 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brd7O88665 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brd7O88665 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brd7O88665 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brd7O88665 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Brd7O88665 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brd7O88665 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Brd7O88665 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.79■□□□□ 0.28
Brd7O88665 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Brd7O88665 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brd7O88665 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brd7O88665 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brd7O88665 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Brd7O88665 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brd7O88665 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brd7O88665 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brd7O88665 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Brd7O88665 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brd7O88665 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.79■□□□□ 0.28
Brd7O88665 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brd7O88665 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.78■□□□□ 0.28
Brd7O88665 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brd7O88665 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brd7O88665 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Brd7O88665 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brd7O88665 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.78■□□□□ 0.28
Brd7O88665 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brd7O88665 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Brd7O88665 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Brd7O88665 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Brd7O88665 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brd7O88665 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.78■□□□□ 0.28
Brd7O88665 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Brd7O88665 Gm5921-201ENSMUST00000075898 882 ntBASIC16.78■□□□□ 0.28
Brd7O88665 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Brd7O88665 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brd7O88665 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Brd7O88665 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Brd7O88665 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brd7O88665 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brd7O88665 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brd7O88665 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brd7O88665 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Brd7O88665 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Brd7O88665 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Brd7O88665 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Brd7O88665 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Brd7O88665 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Brd7O88665 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brd7O88665 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brd7O88665 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brd7O88665 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brd7O88665 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Brd7O88665 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brd7O88665 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brd7O88665 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms